Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01021 ATGCCCACTTCTTTCTGCAACTCTTGCCTTGGAATCTTTCAATTGAAAAGCAGCTTTGAGGAGCAGACAAAGATGAACAAGGTTGCTCCAAAAATTCTAGTTTCAACTTTGTACCTCCTCATATTGTCCTTTCCTGTCCAAACTCTGACACATGTTGCTGATACAGACAACAGTCATAGTGGTGAAGGTGAGGTTTTCAGCAAAAGCTGCAACAATGAATCCCCCTCAATATCCTTCTCTTCCTCATGTCAAAAATCAAAAAGAACTGAAGTATCTCAAGTTTTACCTCTCCAAACAGATGGTTTGGTATTTGCAGATCAGAGACTCGAAGTTGTATACCCAGTGATCCAAAAATTCAAGTCCAGCATCACTTTTGATCCATTAGGCGTCACCAAATCATGGGTTGGTTCCGATATTTGCACCTACAAAGGTTTCCATTGTGATAACCCCCCAGATAACACTTCAGCCATTGCTGTGGCCTCCATTGATTTCAATGGATTTCAACTTGGAGCTCCAACACTGGATGGCTTCATCGATCAGCTTCCTGATATTGCTCTGTTCCATGCAAATTCCAACAATTTTAGAGGCACCATCTCCACCAAAATCTCCAAGCTCTCTTATCTTTATGAGCTTGATGTAAGCAACAATCAGCTATCTGGTCCATTTCCCATGGCTGTGTTGGGCATGAACACCCTAACATTCTTGGACCTTCGCTTCAACTTGTTCTCTGGGCAAGTCCCTCCTCAGATATTCACCCAGAATCTCGATGTCCTCTTCATCAACAACAATGACTTCACTCAGAGCTTGCCTGATAACCTAGGAAGCACTCATATTCTTTATCTCACCTTAGCCAACAACAAATTCATGGGTCCTATACCTAGAAGCCTCCCTAAAGCTTTGTCCACTCTCACTGAGGTGCTATTCCTGAACAACCAGTTAACAGGTTGTATCCCACATGAGATCGGGCTACTTAAAGAGGCTAGAGTGTTTGATGCTGGGAACAACCAGTTAACAGGTCCATTGCCTATGTCTTTGGGTTGCCTTGAGCAGTTGCAACTTCTCAATTTGGCAGGTAATCTTTTGTATGGTATGGTACCAGAAGTGGTGTGTGGACTAGAGAATTTGGTCAATTTATCACTTTCAGACAATTATTTCATACATGTAGGACCTTTGTGTAGGAGCTTAATTCAGCGAGGGGTTCTTGATATTAGGAACAATTGCATTCCTGATCTTCCATTCCAGAGATCAATGATTGAGTGTGCAGATTTCTTTGCGCACCCTAGATTTTGTTCCCACATGTGGTTTCATAGTTTCATTCCTTGTAAGTTTTCTTTCCACAAGTCTTCAGTCTCTGCCATTCCTAAGATAGCTCCTTCTTCTCCTTGA 1386 0.4228 MPTSFCNSCLGIFQLKSSFEEQTKMNKVAPKILVSTLYLLILSFPVQTLTHVADTDNSHSGEGEVFSKSCNNESPSISFSSSCQKSKRTEVSQVLPLQTDGLVFADQRLEVVYPVIQKFKSSITFDPLGVTKSWVGSDICTYKGFHCDNPPDNTSAIAVASIDFNGFQLGAPTLDGFIDQLPDIALFHANSNNFRGTISTKISKLSYLYELDVSNNQLSGPFPMAVLGMNTLTFLDLRFNLFSGQVPPQIFTQNLDVLFINNNDFTQSLPDNLGSTHILYLTLANNKFMGPIPRSLPKALSTLTEVLFLNNQLTGCIPHEIGLLKEARVFDAGNNQLTGPLPMSLGCLEQLQLLNLAGNLLYGMVPEVVCGLENLVNLSLSDNYFIHVGPLCRSLIQRGVLDIRNNCIPDLPFQRSMIECADFFAHPRFCSHMWFHSFIPCKFSFHKSSVSAIPKIAPSSP 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01021 461 Gene3D Ribonuclease Inhibitor 114 275 IPR032675 -
Accr3g01021 461 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 74 443 - -
Accr3g01021 461 Pfam Leucine rich repeat N-terminal domain 117 148 IPR013210 -
Accr3g01021 461 SUPERFAMILY L domain-like 118 408 - -
Accr3g01021 461 Gene3D Ribonuclease Inhibitor 276 418 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01021 Accr-Chr3 11512384 11513769 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01021 102 427 Leucine-rich Repeat extension Gene Families AT3G24480 43.252 2.06e-85 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01021 - - gmx:100789584 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01021 3 11512384 11513769 Accr3g01021 3 11512384 11513769 ECH