Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01019 ATGGCTGTAGAGCTTATATCGGGTTATGGGGATGATAGTTTTGCAGGCAGGACGGAACTAGACAACACAATCGCGGTGCAGGAAGCTACAGCCGCCGGTATTCACAGCGTCGAGAAGCTCATGACAATAATTTCTCAGCACAGAGAGGAGGAGGTTTCCGGCTCCCGAGGAGAACCTTCGGAACTGGAAGTTCTGGCAGATTCGGCGATGAACAAGTTCAAAAGGGTTATTTCTCTGTTGGACCGGCCAAGAGTTGGCCACGCTCGTTTCAGAAAAGCTCCTCCGACGACACAGGCTTCGATTCCTTTCCTCCAGCCACAGCAGACGCTGGATTCTGAAACCCCAATGCCTCCTGTTACAGAACCCCAACACAACAAAACAGAGCAACCCTCTGCTTTTAAGGTTTATTGTCCCACGCCAGTTTTACGTCTCCCGCCTCTGCCTCACCAGGCGCACCAACCTTCCCCCTTTCATCGGGTGGAGAAGAAGGAGGCCAACGGAAGTCTCCAATTTTCGGCGTCACCGCCAGTATCCGCCGCCAATTCGTACATATCAGCGTTAACAGGGGATACTGATAGTATGCAACGTTCTTGTCATTCTTCGGGGTTCCAAATCATTCACAGTCAGAGATCACAGCAGGGATCCTACATGGGCAAGCCACCATTGTTTTCGAGTTCTTTAAAGAGGAAGTGCAATTCAATGGACGATGCTGGTCTCAAGTGTGGATCATCTGGTCGCTGCCATTGCTCCAAGAAAAGGAAATCAAAGGTAAGGAGAGTGGTCAGAGTTCCAGCAATCAGCTCGAAGATGGCTGATATTCCAGCGGATGAATATTCGTGGAGAAAATATGGACAAAAACCCATTAAGGGTTCTCCTCACCCCAGGGGTTATTACAAGTGTAGTAGTGTGAGAGGCTGCCCAGCACGCAAACACGTGGAGCGTGCTCTGGATGATCCAACCATGCTTATTGTCACCTATGAAGCAGATCATAATCACTCGCTGGAGGTTGCAGCCGCCGTCGTCCTCGAATCATCTTAG 1038 0.5029 MAVELISGYGDDSFAGRTELDNTIAVQEATAAGIHSVEKLMTIISQHREEEVSGSRGEPSELEVLADSAMNKFKRVISLLDRPRVGHARFRKAPPTTQASIPFLQPQQTLDSETPMPPVTEPQHNKTEQPSAFKVYCPTPVLRLPPLPHQAHQPSPFHRVEKKEANGSLQFSASPPVSAANSYISALTGDTDSMQRSCHSSGFQIIHSQRSQQGSYMGKPPLFSSSLKRKCNSMDDAGLKCGSSGRCHCSKKRKSKVRRVVRVPAISSKMADIPADEYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPTMLIVTYEADHNHSLEVAAAVVLESS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01019 345 SMART WRKY_cls 274 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g01019 345 SUPERFAMILY WRKY DNA-binding domain 272 333 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr3g01019 345 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 26 335 IPR044810 GO:0003700
Accr3g01019 345 FunFam WRKY transcription factor 65 258 335 - -
Accr3g01019 345 ProSiteProfiles WRKY domain profile. 269 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g01019 345 Pfam WRKY DNA -binding domain 276 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g01019 345 MobiDBLite consensus disorder prediction 108 128 - -
Accr3g01019 345 Pfam Plant zinc cluster domain 228 272 IPR018872 -
Accr3g01019 345 Gene3D WRKY domain 256 334 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01019 Accr-Chr3 11497942 11499203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01019 1 295 WRKY Transcription Factor Family AT4G24240 45.171 1.16e-72 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr3g01019 WRKY 3.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01019 - - lja:Lj0g3v0162929.1 395.586