Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01012 ATGCATATCTTAATCGTCTTCCTCCTTTCTTTTGCTCTTTGTATTCCTTCTTCTTGTTCATCTGCAGCCACAGATACCCTCCTTCAAGGTTCTTCTCTCTCAGTTGAGAAACCAAACGATACACTCGTGTCAGCCAATGGTGTCTTCTCCGCTGGCTTCTTTAAAGTGGGCGACAATGCTTTCTGCTTTTCCATATGGTTCACAAAATCCAAGCAACCCACTCTTGTCTGGATCGCAAATCGAGATCAACCCGTTAATGGGAAAGCTTCAAGATTAACACTTTCCAACAATGGCAACCTGATTTTGAGCGATGCAGGGGCAAGTGCAACCACCATTTGGACCACAACGACGTCGTCCTCTTCGGAAGTGCATCTCAAGCTCAGGGACAACGGCAACCTCGTACTTCGTACTCCGCAAGGCACTGTCTTATGGCAAAGCTTTGACTCCCCAACCGATACCCTTCTTCCTGGTCAACCACTCACAGAGAAAGCCAGCCTTATTTCATCCAGAAGCACCACCAACTTTTCCTCTGGTTTCTATAAGCTTTACTTCGACAACGACAATGTTCTTCGGCTTCTTTTCAAAGGCCCTAACGTTTCTAGCGTATACTGGCCTGCCACGTGGATACTTCCCGTTGATCAAGGCAGGTCCACCTACAACATAACTAAAATTGCTCTGCTAGATCCCTTTGGCCATTTCACTTCCTCTGATACTTTCCAATTCTATCCATCTGATTATGGTGTTAAACGCTATAGGCGATTCAAGGTGGATTCTGATGGTAACTTGCGTCTCTATAGCTTCAATGAAGAAACTAGCATGTGGGAGGTCACATGGCAAGTCTTAGCCGAACCATGTACGGTTCATGGTCTTTGTGGAGCTAACAGTATGTGCACTTATGACCCTTTCTTGGGAAGGACTTGTTATTGCTTACAAGGATTCAAGATTAAGAATCCTAATGACTGGACTCAGGGTTGTGAACCGGAATTTACAACCCCTCGTTGCAATAATTCCGCTGAGTTTGGTTTTGTTCATCTTCCCAGAATGGAATTATTCGGCTACGACTTGGAGATAATCCCTGTAACAAACTTGACACAATGTGAAAATAGGTGCCTAGAGCTTTGTGATGATTGTAAAGGCGTCCAATTCAAATTCAACGAAAAAAGTACTTACAATTGCTACATCAAAACAATATTGCTCAACGGACGAGACTCCCCTAATTTCGATGGAGAGGCCTATCTCAAATTGCCAAAATCAACTCTGCTTTTCCTTAAAGTTCCTCTGAAACATGTGCCATTGAAGTGTTCAGCCAATATGTCTCAGAGCTTGGATAGAACCTACCAAGATCCCAAAAAGAGCACGTGGTTGAATTTTTTGCTTTGGTTCGCTTGTGGGATTGGAGCATTCGAGATTACCTGCATTTTCTTCGTATGGTTCTTCTTGTTTAGAAGCAGCAAGGAAAATGATCAAGGAGAGAGACAGCAACTAATTTCTGCTACAGGGTTCCGAAGGTTCACCTATTCAGAGCTCAAAAAGGCGACACGTGGATTCAGCGATGAGGTAGGACGAGGAGCAGGAGGGATCGTGTACAAAGGGACACTAGACAACAATCGTGTGGCAGCAATCAAGTGCCTTATTAATGAAACTAATGAAGGAGAAGCAGAGTTTCTGGCTGAACTTAGCACTATTGGGATGTTGAACCACATGAATTTGATAGACATGTGGGGATACTGCGTGGAGGGGAAGCACAGAATGTTAGTGTACGAGTACATGGAGCATGGATCTTTAGCAGAGAATCTCTGTTCCAATTCACTCGACTGGAACAAAAGGTTTAATATTGCAGTTGGGACAGCCAGAGGTTTAGCTTATTTGCACGAAGAATGCTTGGAATGGGTTCTACATTGCGACGTGAAGCCTCAAAACATACTCTTAGATTCAGAGTTCCAACCCAAAGTAGCTGATTTTGGCTTGTCTAAGCTGCTTAATAGGGACGACCAGCGTGCCAATTCCGGTTTTTCCAGAATAAGAGGGACGAGAGGGTACATGGCTCCAGAATGGGTGTACAATCTGCGAATTACTTCCAAAGTCGATGTATATAGCTATGGAATTGTGGTGTTGGAAATGATAACTGGAAAAAGTCCAATGGGAATACATAGCCAAGGAAATGAAGGAGGAATAGATCAACGGAGGTTGGTGACGTGGGTGAAGGAGAAGTTGAATGGTGCTTCTGAGAGGGAGAGTAGTTGGATTGAGGAGATAGCAGATGGGAATATGGAAGGGAATTACGAGGCTGCAAAGTTGGAGTTGTTGGTGAAAGTGGCTTTGCGGTGTGTGGAAGATGACATGGACGCAAGGCCCTCCATGGGCCAAGTAGTGGAGATGCTTCAGTTTCCAGAATATAGATCCTTCCAATAA 2412 0.4432 MHILIVFLLSFALCIPSSCSSAATDTLLQGSSLSVEKPNDTLVSANGVFSAGFFKVGDNAFCFSIWFTKSKQPTLVWIANRDQPVNGKASRLTLSNNGNLILSDAGASATTIWTTTTSSSSEVHLKLRDNGNLVLRTPQGTVLWQSFDSPTDTLLPGQPLTEKASLISSRSTTNFSSGFYKLYFDNDNVLRLLFKGPNVSSVYWPATWILPVDQGRSTYNITKIALLDPFGHFTSSDTFQFYPSDYGVKRYRRFKVDSDGNLRLYSFNEETSMWEVTWQVLAEPCTVHGLCGANSMCTYDPFLGRTCYCLQGFKIKNPNDWTQGCEPEFTTPRCNNSAEFGFVHLPRMELFGYDLEIIPVTNLTQCENRCLELCDDCKGVQFKFNEKSTYNCYIKTILLNGRDSPNFDGEAYLKLPKSTLLFLKVPLKHVPLKCSANMSQSLDRTYQDPKKSTWLNFLLWFACGIGAFEITCIFFVWFFLFRSSKENDQGERQQLISATGFRRFTYSELKKATRGFSDEVGRGAGGIVYKGTLDNNRVAAIKCLINETNEGEAEFLAELSTIGMLNHMNLIDMWGYCVEGKHRMLVYEYMEHGSLAENLCSNSLDWNKRFNIAVGTARGLAYLHEECLEWVLHCDVKPQNILLDSEFQPKVADFGLSKLLNRDDQRANSGFSRIRGTRGYMAPEWVYNLRITSKVDVYSYGIVVLEMITGKSPMGIHSQGNEGGIDQRRLVTWVKEKLNGASERESSWIEEIADGNMEGNYEAAKLELLVKVALRCVEDDMDARPSMGQVVEMLQFPEYRSFQ 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01012 803 SMART ntp_6 337 415 IPR003609 -
Accr3g01012 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Accr3g01012 803 ProSiteProfiles Bulb-type lectin domain profile. 24 148 IPR001480 -
Accr3g01012 803 Gene3D Transferase(Phosphotransferase) domain 1 590 800 - -
Accr3g01012 803 SMART serkin_6 514 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01012 803 Pfam Protein kinase domain 518 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01012 803 Gene3D - 18 149 IPR036426 -
Accr3g01012 803 CDD PAN_AP_plant 330 416 - -
Accr3g01012 803 SMART blect_4 33 150 IPR001480 -
Accr3g01012 803 CDD B_lectin 37 150 IPR001480 -
Accr3g01012 803 Pfam D-mannose binding lectin 74 162 IPR001480 -
Accr3g01012 803 ProSiteProfiles PAN/Apple domain profile. 334 419 IPR003609 -
Accr3g01012 803 SUPERFAMILY Protein kinase-like (PK-like) 493 797 IPR011009 -
Accr3g01012 803 Gene3D Phosphorylase Kinase; domain 1 485 589 - -
Accr3g01012 803 Pfam S-locus glycoprotein domain 246 316 IPR000858 GO:0048544
Accr3g01012 803 CDD STKc_IRAK 520 795 - -
Accr3g01012 803 PANTHER OS07G0415500 PROTEIN 6 795 - -
Accr3g01012 803 PIRSF SRK 1 798 IPR024171 GO:0004674
Accr3g01012 803 ProSitePatterns Protein kinases ATP-binding region signature. 520 542 IPR017441 GO:0005524
Accr3g01012 803 ProSiteProfiles Protein kinase domain profile. 514 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g01012 803 FunFam S-receptor-like serine/threonine-protein kinase 483 589 - -
Accr3g01012 803 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 205 IPR036426 -
Accr3g01012 803 FunFam Serine/threonine-protein kinase 590 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01012 Accr-Chr3 11364274 11366685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01012 456 795 Receptor kinase-like Gene Family AT5G45780 37.822 4.42e-67 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Accr3g01012 Pkinase 1.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01012 - - gmx:100816469 1082.4