Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01008 ATGCAGACCAGAGCTGCCAAGAGGAGAGCAGAAGCCGCCGCAATCCCCCAGGTTGAATCTCCCAACAAGAAGCGTGTAGTATTGAGGGAACTTTCAAATGTATCGAATGTTACCTTTCCCGCTGTTTTGAATCAGAAATGCCGAAAGAAGACCCTCCCATTGGATCCTAATACCAATATCAAGGACAACGAGGCAGTGCACGTTGTTTCTAAGTTAGATGCTGATGTCAAGATGAACGATCCTTATGTCTCTCAGATCTACCAATACCTTCGCGAAATGGAGATGGAGGCGAACCGAAGACCAATGCCTGACTACCTCGAGAAGGTTCAAGAGGACTTCGGTGCTAACGCTAGAGGAACATTGATTAGTTGGTTAGCGGAGGTGACGGAGGAGTACAGGCTTCTCTTGGACACGTTTCATCTCTCCGTTTCTTACATTGATAGATTCCTCTCTGCTAAGATCGTTAGTAGGCAGAGGCTTCAATTGCTCGGCGTTTCATCGATGCTCATTGCATCGAAGTATGAAGAACTCACCCCTCCTCATGTGGAACGTTTCTGCTACATAACTGATAATACGTACAACCAGGCAGAAGTTGTGGAGATGGAAGCTGATGTGCTCAAGTCCTTGAATTTTGAAGTGGGAAATCCTACTGTAAATACATTTCTAAGGAGGTTTGCTGAGATTGCTAGTGAGAATCAGAAAACTCATAAATTGGAGTTTGGGTTTCTGGGAGACTATCTTGGCGAACTAAGTTTGTTGGATTACAATTGTGTAAAATTATTGCCGTCTATGGTGGCTGCATCAGCTATTTTTCTAGCCAGGTTTATCTTATGGCCCAAAGTCCATCCCTGGACTTCAGCTCTGCAACGATACTCTCGATACAAGTCCCGTGAGTTAAAGCAATACGTGCTTATCTTACACGATTTATACCTGGCTAGAAAAGTGGGCTCTTTGCAATCTATAAGGGACAAGTACAGGCAGCACAAGTTCAAGAATGTGGCAACCTTGCCATCTCCTCCGGAGATACCAGAAACTTATTTCAAGAAATGGTGA 1053 0.4454 MQTRAAKRRAEAAAIPQVESPNKKRVVLRELSNVSNVTFPAVLNQKCRKKTLPLDPNTNIKDNEAVHVVSKLDADVKMNDPYVSQIYQYLREMEMEANRRPMPDYLEKVQEDFGANARGTLISWLAEVTEEYRLLLDTFHLSVSYIDRFLSAKIVSRQRLQLLGVSSMLIASKYEELTPPHVERFCYITDNTYNQAEVVEMEADVLKSLNFEVGNPTVNTFLRRFAEIASENQKTHKLEFGFLGDYLGELSLLDYNCVKLLPSMVAASAIFLARFILWPKVHPWTSALQRYSRYKSRELKQYVLILHDLYLARKVGSLQSIRDKYRQHKFKNVATLPSPPEIPETYFKKW 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01008 350 Gene3D - 86 335 - -
Accr3g01008 350 Gene3D - 101 214 - -
Accr3g01008 350 Pfam Cyclin, C-terminal domain 216 339 IPR004367 -
Accr3g01008 350 SUPERFAMILY Cyclin-like 76 213 IPR036915 -
Accr3g01008 350 SUPERFAMILY Cyclin-like 216 341 IPR036915 -
Accr3g01008 350 PIRSF Cyclin_A_B_D_E 2 346 IPR046965 GO:0016538|GO:0044772
Accr3g01008 350 ProSitePatterns Cyclins signature. 118 149 IPR006671 -
Accr3g01008 350 SMART Cyclin_C_2 216 339 IPR004367 -
Accr3g01008 350 Pfam Cyclin, N-terminal domain 86 213 IPR006671 -
Accr3g01008 350 PANTHER CYCLINS 62 326 IPR039361 -
Accr3g01008 350 FunFam Cyclin superfamily protein, putative 214 285 - -
Accr3g01008 350 SMART cyclin_7 123 207 IPR013763 -
Accr3g01008 350 SMART cyclin_7 220 308 IPR013763 -
Accr3g01008 350 FunFam G2/mitotic-specific cyclin 101 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01008 Accr-Chr3 11296288 11298108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01008 3 348 Core Cell Cycle Gene Families AT5G43080 54.520 7.10e-133 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01008 K06627 - qsa:O6P43_016015 418.313