Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00956 ATGAAGTCCATGAATGATAGCAGGAACACCAACAACGATGGGAGTGGGGATGATAATAGTAGTAATCAAAACTGGTTGGGCTTTTCTCTGTCACCCCACATGAAAATGGAGCTAACTTCTGGTCCTCCCCTCCATCACCACGATCATCATCAACCTCAGGCTTCAACTGCCGCCGTCTCTAGCTCTGTTCCGGCAACCTTCTGTTTGTCGCCTTCTCAGCTCAGCACGTATGGAATATGTTATGGTGCGGCGGAGAACACAGGCTTTCATTCTCCTTTAACCGTCATGCCTCTCAAGTCCGACGGCTCACTTTGCATAATGGAAGCTCTCACTAGATCACAAACTCCTCAAGTGATGATGCCGAATTCGTCTCCGAAACTGGAGGACTTTCTTGGTGGTGCAACTATGGGGACTCACGATGCAATGTCTTTGAGCCTCGATAGCATCTACTATGGCACTCAGAATGCACATCCTCAAGCCCCCAGAGACCATTCTCTTGACTTTCTTTCAGAGCCTTTCAGACACCACCAAGACCCCATTTCTGCGCACTCACACCATCCTTATTATTCTGGAATTGCTTGCCATTCTTCTATTTATCCATCATTGGAGCATCAAAGCAAAGACCCCCAAATGCAACCATCAATGTCATCCGAGGAAGGTATCGCTTGTCTGAAAAACTGGGTGACTCCCGGCAGGGACTATCCCGTTCAACAGCATAGAAAGAATGGAAGCACGGAGGATGACGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGAGCTTCTGGGTCAGTTGGTAAAGTTGGGTGCGGAGATTTTCAGTCTCTTGGCTTATCTGTGAGCCCGGGTTCCCAATCCAGCTGTGTAACTGCGCCACAGCAGATTTCACCCTCTGCCACTGATGTGGTTGCAATGGAAGCCAAGAAGAGAGGGCCTGGAAAGTTGGGCCAGAAACAGCCTGTGCATAGGAAATCGATCGACACTTTTGGACAAAGAACGTCTCAGTTCCGAGGCGTCACAAGGCACAGATGGACTGGTAGATATGAAGCGCATTTATGGGATAACAGTTGTAAGAAGGAAGGGCAGACGAGGAAAGGAAGACAAGTTTATTTGGGGGGCTATGATATGGAAGAGAAAGCTGCAAGAGCCTATGATCTAGCTGCCCTCAAGTACTGGGGACCCTCAACCCACATTAACTTTCCGTTGGATAATTACCAGGTGGAACTTGAAGAGATGAGGAACATGAGCAGACAAGAGTACGTTGCCCACTTGAGAAGAAAAAGCAGTGGTTTTTCCAGAGGGGCTTCAATGTATAGAGGAGTGACGAGGCATCATCAACATGGAAGATGGCAAGCAAGGATTGGTAGAGTTGCAGGAAACAAGGACCTTTATCTTGGAACATTCAGCACTCAGGAGGAAGCAGCAGAAGCATATGACATAGCTGCAATCAAGTTCCGAGGTGTGAACGCAGTGACCAACTTTGACATATCTAGGTACGATGTGGAAAGGATCATGGCCAGCAATACCCTCCTGGCCGGTGAGCTGGCTCGAAGAAACAAAGACGCCCAGCCGAGGATGGAAGCCATTGAGTACAATGTGACATCGAACCAGAGCAATGGGGAAGCGGTTCAAGCCCAAAGGAACAACAACAACGAGAACAGCGGTTCGGAGTGGAAGATGTTGTATTCTCCAAATAGCTGTGAGCAGAAAACCGTGAACTGCGGAAATTACAAGAATACAGCCATATCTGTGGCCCTACAGGATCTCATTGGGATTGACTCGGCCGGCTCGGGTCATCAGGCCACGCTGGAGGACACTACAAAGATGGGCACTCGTTTTTCAAACCCGTCCTCGTTGGTCACGAGCCTAAGCAGCTCAAGAGAGGGAAGTCCGGATAAAACTGGTCCCACCATTTTGTTTCCAAAGCCTCCTCCAATAACATCAAAGATTGTTAGCCCCATAGGTAGTGGAGTTAGTTCATGGTTCCCTTCAGCAGCATCTCAGAGTTTGAGGCCAGCTTCAATGGCTCACTTGCCAGTTTTTGCTGCTTGGAACGATAGTTAG 2061 0.4896 MKSMNDSRNTNNDGSGDDNSSNQNWLGFSLSPHMKMELTSGPPLHHHDHHQPQASTAAVSSSVPATFCLSPSQLSTYGICYGAAENTGFHSPLTVMPLKSDGSLCIMEALTRSQTPQVMMPNSSPKLEDFLGGATMGTHDAMSLSLDSIYYGTQNAHPQAPRDHSLDFLSEPFRHHQDPISAHSHHPYYSGIACHSSIYPSLEHQSKDPQMQPSMSSEEGIACLKNWVTPGRDYPVQQHRKNGSTEDDGGGGGGGGGGGASGSVGKVGCGDFQSLGLSVSPGSQSSCVTAPQQISPSATDVVAMEAKKRGPGKLGQKQPVHRKSIDTFGQRTSQFRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLDNYQVELEEMRNMSRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDISRYDVERIMASNTLLAGELARRNKDAQPRMEAIEYNVTSNQSNGEAVQAQRNNNNENSGSEWKMLYSPNSCEQKTVNCGNYKNTAISVALQDLIGIDSAGSGHQATLEDTTKMGTRFSNPSSLVTSLSSSREGSPDKTGPTILFPKPPPITSKIVSPIGSGVSSWFPSAASQSLRPASMAHLPVFAAWNDS 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00956 686 ProSiteProfiles AP2/ERF domain profile. 334 400 IPR001471 GO:0003700|GO:0006355
Accr3g00956 686 SMART rav1_2 334 406 IPR001471 GO:0003700|GO:0006355
Accr3g00956 686 SMART rav1_2 436 500 IPR001471 GO:0003700|GO:0006355
Accr3g00956 686 MobiDBLite consensus disorder prediction 232 262 - -
Accr3g00956 686 Pfam AP2 domain 437 486 IPR001471 GO:0003700|GO:0006355
Accr3g00956 686 Pfam AP2 domain 334 392 IPR001471 GO:0003700|GO:0006355
Accr3g00956 686 Gene3D AP2/ERF domain 333 402 IPR036955 GO:0003700|GO:0006355
Accr3g00956 686 Gene3D AP2/ERF domain 436 496 IPR036955 GO:0003700|GO:0006355
Accr3g00956 686 MobiDBLite consensus disorder prediction 1 29 - -
Accr3g00956 686 ProSiteProfiles AP2/ERF domain profile. 436 494 IPR001471 GO:0003700|GO:0006355
Accr3g00956 686 SUPERFAMILY DNA-binding domain 333 402 IPR016177 GO:0003677
Accr3g00956 686 SUPERFAMILY DNA-binding domain 435 496 IPR016177 GO:0003677
Accr3g00956 686 MobiDBLite consensus disorder prediction 608 643 - -
Accr3g00956 686 CDD AP2 435 496 IPR001471 GO:0003700|GO:0006355
Accr3g00956 686 MobiDBLite consensus disorder prediction 608 631 - -
Accr3g00956 686 CDD AP2 333 400 IPR001471 GO:0003700|GO:0006355
Accr3g00956 686 MobiDBLite consensus disorder prediction 1 57 - -
Accr3g00956 686 FunFam AP2-like ethylene-responsive transcription factor ANT 333 402 - -
Accr3g00956 686 PRINTS Ethylene responsive element binding protein signature 476 496 IPR001471 GO:0003700|GO:0006355
Accr3g00956 686 PRINTS Ethylene responsive element binding protein signature 335 346 IPR001471 GO:0003700|GO:0006355
Accr3g00956 686 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 117 569 - -
Accr3g00956 686 FunFam AP2-like ethylene-responsive transcription factor 435 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00956 Accr-Chr3 10706261 10709555 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00956 13 521 AP2-EREBP Transcription Factor Family AT4G37750 51.657 7.68e-156 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Accr3g00956 AP2 3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00956 K09285 - qsa:O6P43_019045 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00956 3 10706261 10709555 Accr3g00956 3 10706261 10709555 ECH