Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00955 ATGGGTGGTCATGAAAATGCCATGGGTTTTCAACATGGACAGGAGACAATCGTGAATTGCACGTCATCTGGTTTGAGCACCAACGTTTCTGAGATTGCAATTAGCTCTGTGTCTATGGCCAAGCCTCATGTTGTGACTAATCCTTTTCTTGGGTCTTCTTCTTCTTCCACCTGGGATCCTCTTGTTTCCCTGAGCCAGACTCAAACTTTTGGAGGCTCTTCCATGGTTTCTCCCAGTGAGTTTGGCAGTTCATCTTACCCCCTTGTGTTGGAAAATCAGGGAATGAGCAGCACATCTCACCACCTTGTTCAATATGTGTCCGAATCTAATTTCGCCGTTCCTTCCTATGCAAGTGGAAGCTTCTCCGAAATGGTTGGCTCTTTTCCCCAACATGGTGGGTGTTCTGATTTAGCTAATACAAGGTATGGCCCAAGTTACAACCAAAACGAGGAGGCAGCTATGAAAAGGGTTTCATTAAATGGTTCACAATCTCAGCCTGAGGATCCGACTCCTCAAGAAGGAGACACAGGATCTGCACCTAATGCAAGTAGAAGAAAACGAGGGCTTGATCAGAATCCTACGTTCAATCCAAACAAGAACGCTGAAGGGGAACCAATGAAGGATTCTTCTGGGAAGAGCTCAGATGGGGCAAAAGAACAAGATGAGAAGAAACAAAAGGTTGAGCAAAACAATACTAGCGCGGATTTGCGTGGTAAGCAATCATCAAAGCAAGTTAAAGACAACTCTCAAAGTGGAGAAGCTCCCAAAGAAAATTTCATTCATGTGAGGGCTCGAAGAGGTCAAGCTACAAACAGTCATAGCCTTGCAGAAAGGGTAAGAAGAGAGAAGATTAGTGAGCGAATGAGGCTGCTTCAAGAACTTGTTCCAGGATGCAACAAGATAACTGGGAAAGCAGTGATGCTGGATGAGATTATTAACTATGTGCAATCGTTGCAGCAACAGGTTGAGTTTTTGTCAATGAAACTGGCCACCGTGAACCCAGAACTGAATTTTGATGTAGAAAGGATCCTATCCAAAGATATTCTTCAGTCGCGCATCGCAAATGGGACTATTGGTGGATATGGTATGAACTCTTCTCACCCGTTCCCTAGTGGAAGTTTTCAGGGAACTCTTCCAGGACCAGGCGTACCCAACACATCACCACTATTCCCTCCGTTGCCTCAGAGTGTTTTAGAGCATGAGTTCCAAAATTTGTATGGAATGGGATATGATTCCAGTACAGCTCTTGACAATGCAGGACCCAGTGGGAGGTTGAAAACAGAATTGTAA 1290 0.4473 MGGHENAMGFQHGQETIVNCTSSGLSTNVSEIAISSVSMAKPHVVTNPFLGSSSSSTWDPLVSLSQTQTFGGSSMVSPSEFGSSSYPLVLENQGMSSTSHHLVQYVSESNFAVPSYASGSFSEMVGSFPQHGGCSDLANTRYGPSYNQNEEAAMKRVSLNGSQSQPEDPTPQEGDTGSAPNASRRKRGLDQNPTFNPNKNAEGEPMKDSSGKSSDGAKEQDEKKQKVEQNNTSADLRGKQSSKQVKDNSQSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVERILSKDILQSRIANGTIGGYGMNSSHPFPSGSFQGTLPGPGVPNTSPLFPPLPQSVLEHEFQNLYGMGYDSSTALDNAGPSGRLKTEL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00955 429 FunFam Basic helix-loop-helix transcription factor 265 337 - -
Accr3g00955 429 Gene3D - 265 339 IPR036638 GO:0046983
Accr3g00955 429 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 162 363 IPR024097 GO:0006355
Accr3g00955 429 MobiDBLite consensus disorder prediction 231 255 - -
Accr3g00955 429 CDD bHLH_AtBPE_like 258 343 - -
Accr3g00955 429 MobiDBLite consensus disorder prediction 156 278 - -
Accr3g00955 429 SMART finulus 274 324 IPR011598 GO:0046983
Accr3g00955 429 MobiDBLite consensus disorder prediction 156 199 - -
Accr3g00955 429 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 266 336 IPR036638 GO:0046983
Accr3g00955 429 Pfam Helix-loop-helix DNA-binding domain 271 319 IPR011598 GO:0046983
Accr3g00955 429 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 268 318 IPR011598 GO:0046983
Accr3g00955 429 MobiDBLite consensus disorder prediction 205 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00955 Accr-Chr3 10675791 10677881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00955 1 429 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 41.839 1.18e-85 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr3g00955 HLH 4.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00955 - - gmx:100794464 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00955 3 10675791 10677881 Accr3g00955 3 10675791 10677881 ECH