Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00947 ATGGGGAGGGCTCCTTGCTGTGATAAAGCAAACGTGAAGAAAGGACCTTGGTCTCCTGAAGAAGATGCCAAACTCAAGTCCTACATCGAGCAACATGGAACTGGTGGTAACTGGATCGCTTTGCCTCAAAAGATCGGGCTAAAGAGATGCGGGAAGAGTTGTCGATTGAGGTGGCTAAACTATCTTCGACCAAATATAAAGCATGGGGGTTTCTCTGAAGAAGAAGATAACATTATTTGCAGCCTGTACGTTAGTATTGGAAGCAGGTGGTCGGTGATAGCAGCACAATTGCCAGGAAGAACAGACAACGACATAAAGAATTACTGGAACACAAAACTCAAGAAGAAGCTTCTGGGCAATAAGCACCGTAAAGATCAACAATCACGTAGTAAGAGCAAGCAGGAAGGAGCAAATAGAATCATCACCTCTCCTAACTCCTTATTAGTTCCTGAAAATTCTACAACTACCATTTTCCCACAACCATATTGGCCACTCATGCCCGTAATTCCTTCCTTGCAATATTCATCAAATCAAGACCCATCTTTCAACGATCAAGATTCCATCAAAAAATTGCTCATGAAACTAGGAGGAAGATTTTCTGACGAGGAAAACGGGTGGTCTAGTCCACAAGGTTCCCATCAGGTGGGGTCTGGGGATGATCACGATAATTATCACCCTACCCTTGATGCTTTGAATATTAATCCTAATCCATTCCCAGATGGTACTCCCAGCTGCACACAACTTGTTTGTGAAGAACAATCAAATATCGCTTATTCTTCCTCTTGCATGGTAAATAACGATACGATTGTTAACAACAACAATCACATTGAATTGGTGGCCCAAGAGACAGGAGGACTTGAGGAGATAGTACTATGCAATAATAGGACTTATCCACAAAGATTAGATGGACTCGAATTGTTGTTTGGGGAGGACATGTTGGTCAATGACAAGATAGCCCCACTTGCAGACCCCAACTCTCTCATTTATCAATCTTTTGTTTCTTCTAATTACCAGGGCATGCCACAACAATGTGCTTCAGAGTTAAGGTTCATTAACCGCCCATAA 1065 0.4244 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSVIAAQLPGRTDNDIKNYWNTKLKKKLLGNKHRKDQQSRSKSKQEGANRIITSPNSLLVPENSTTTIFPQPYWPLMPVIPSLQYSSNQDPSFNDQDSIKKLLMKLGGRFSDEENGWSSPQGSHQVGSGDDHDNYHPTLDALNINPNPFPDGTPSCTQLVCEEQSNIAYSSSCMVNNDTIVNNNNHIELVAQETGGLEEIVLCNNRTYPQRLDGLELLFGEDMLVNDKIAPLADPNSLIYQSFVSSNYQGMPQQCASELRFINRP 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00947 354 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Accr3g00947 354 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Accr3g00947 354 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Accr3g00947 354 Gene3D - 7 68 - -
Accr3g00947 354 MobiDBLite consensus disorder prediction 119 143 - -
Accr3g00947 354 CDD SANT 71 111 IPR001005 -
Accr3g00947 354 FunFam Transcription factor MYB36 70 139 - -
Accr3g00947 354 MobiDBLite consensus disorder prediction 201 222 - -
Accr3g00947 354 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Accr3g00947 354 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Accr3g00947 354 FunFam Transcription factor RAX3 7 68 - -
Accr3g00947 354 CDD SANT 16 62 IPR001005 -
Accr3g00947 354 PANTHER OS09G0431300 PROTEIN 1 229 - -
Accr3g00947 354 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Accr3g00947 354 Gene3D - 70 141 - -
Accr3g00947 354 MobiDBLite consensus disorder prediction 203 217 - -
Accr3g00947 354 SMART sant 13 64 IPR001005 -
Accr3g00947 354 SMART sant 67 115 IPR001005 -
Accr3g00947 354 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00947 Accr-Chr3 10584603 10586036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00947 1 236 MYB Transcription Factor Family AT3G49690 57.438 1.40e-85 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr3g00947 Myb_DNA-binding 2.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00947 K09422 - gmx:778079 349.747