Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00946 ATGGGTCTTGCCGATATGTGTAACACAGGCCTCGGCCTCGGCCTTGGCCTTAGTCTTCACCATCATCAGTCTGATAATTGCTGCACAGAAATCCCACACGAGAAAGAGGATGATCCGTACAAATGTGACCGGAAGGTTCTGTACCCGTCCCTTACGTTAGGACCGCCCGATGATCAAGAGCCCAACAATCAACAGCTTCTTCCCACCAAGACAGAATTTGTTCATAATTTCCATGCGATAGCTTCTTCTTCTCCTCCCAGCGCCGCCTCTTCCTTCTCCAACTCCTCCAGCATCAAGAGGGAGAATAAGGACTTTGTGGGCGACGACCTTGACCTGGAAGTAGAGAATAAGATCAATAATCCTTCCAAGGTATTAGGCCTCGACGTAGACGACGAGGGTAATCCCAGGAAGAAACTTAGGCTCACCAAAGAACAATCTGCTGTTTTAGAGGACAGCTTCAAAGATCACTCCACTCTCAATCCGAAGCAAAAGCAAGAATTGGCAAGGAAGTTAAACCTGCGTGCCAGACAAGTAGAGGTTTGGTTTCAAAACAGGAGAGCCAGGACAAAACTGAAACAAACGGAAGTTGACTGTGAGTTGCTCAAGAAGTGCTGCGAAACGCTGACGGAGGAGAACAAGAGACTACAAAAGGAGTTGCAAGAACTCAGATCGATGAAAACAACGTCGTCGCAGGGACCCTTGTATATGCAGCTTCCGGCTGCTACCCTCACCTTATGCCCTTCTTGTGAGAGAATCTGCGGAGGCGGAGCCGCCGCCAACGGTTCTCCTGCTACCACCGCCTTCCTTCTCGGATCAAAGGCCCATCATCACTTGTACAAAAGCAACCACCCATTCACCCACTCATCCGCAGCTTGCTAG 879 0.4972 MGLADMCNTGLGLGLGLSLHHHQSDNCCTEIPHEKEDDPYKCDRKVLYPSLTLGPPDDQEPNNQQLLPTKTEFVHNFHAIASSSPPSAASSFSNSSSIKRENKDFVGDDLDLEVENKINNPSKVLGLDVDDEGNPRKKLRLTKEQSAVLEDSFKDHSTLNPKQKQELARKLNLRARQVEVWFQNRRARTKLKQTEVDCELLKKCCETLTEENKRLQKELQELRSMKTTSSQGPLYMQLPAATLTLCPSCERICGGGAAANGSPATTAFLLGSKAHHHLYKSNHPFTHSSAAC 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00946 292 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 11 265 - -
Accr3g00946 292 Coils Coil 198 228 - -
Accr3g00946 292 Pfam Homeobox associated leucine zipper 192 226 IPR003106 GO:0006355|GO:0043565
Accr3g00946 292 SUPERFAMILY Homeodomain-like 134 200 IPR009057 -
Accr3g00946 292 ProSitePatterns 'Homeobox' domain signature. 167 190 IPR017970 GO:0000981|GO:0006355
Accr3g00946 292 FunFam Homeobox-leucine zipper protein 18 123 197 - -
Accr3g00946 292 ProSiteProfiles 'Homeobox' domain profile. 132 192 IPR001356 GO:0003677
Accr3g00946 292 SMART HOX_1 134 196 IPR001356 GO:0003677
Accr3g00946 292 SMART halz 192 238 IPR003106 GO:0006355|GO:0043565
Accr3g00946 292 Gene3D - 129 197 - -
Accr3g00946 292 CDD homeodomain 135 193 IPR001356 GO:0003677
Accr3g00946 292 Pfam Homeodomain 136 190 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00946 Accr-Chr3 10544218 10545356 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00946 1 292 Homeobox Transcription Factor Family AT2G22800 47.231 1.09e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Accr3g00946 Homeodomain 4.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00946 K09338 - gmx:100797650 300.441