Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00926 ATGGGAAGGAAATGCTCGTATTGTGGAAACCTTGGACACAATTCACGGACTTGTAATATTATTGAGAGAGGTGCATTTGATAATGGTGGCCTCAAGATCTTCGGAGTGCAATTCATTGACCCTTCACCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCACCTACTAATCACAGTCATGACATCCAAAGAAGTGTCAGCTTCGACTGCTTATTGCCCTCTCCCCAGATCACCCTCATATCATCAACCACGTCTTCCTCTTCCTCTTACGACAATTCATATCGTCACAAAACGTCTGATTCTTATTTAGCCCCCAGAACCCAAGAAAGGAATAATAAAGGAGTGGCATGGACGGAGGAGGAGCACCAGACATTTCTGATGGGGCTGAAGAAGCTGGGGAAGGGTGATTGGAGAGGCATCTCTAAGAATTATGTGACCACAAGAACACCAACCCAAGTGGCCAGTCATGCCCAGAAATTTTTCCTCCGTCAGAATCATCATGCCAATAAAAGAAAGCGTTATCAAACTCTCCTCCATGATGTGGAGGGAAAAAATAATTACTCAGTCGAACCAGTAAAAAACTATTCTTGCTTTTCTAAGCCCACTACTACTGAAGCTGTTGGTGCTTCTGAGACTATGAACATGGATGTCAGTTGCAGCGGCCACACCAATGGCAAAAGGATTTGTCTCTCTCGGTGGTTTTCAAGTTATCATTCAATGCTTAATTGGTCAGCCTCTTCACCAAAGTGCGCTCTTCACTGCTTAGAACCTGATTTAGAACTCAAACTGGCGGCTCCGAGCTTTCTTTAA 813 0.4502 MGRKCSYCGNLGHNSRTCNIIERGAFDNGGLKIFGVQFIDPSPLPPPPPPPPPPSPTNHSHDIQRSVSFDCLLPSPQITLISSTTSSSSSYDNSYRHKTSDSYLAPRTQERNNKGVAWTEEEHQTFLMGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKFFLRQNHHANKRKRYQTLLHDVEGKNNYSVEPVKNYSCFSKPTTTEAVGASETMNMDVSCSGHTNGKRICLSRWFSSYHSMLNWSASSPKCALHCLEPDLELKLAAPSFL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00926 270 SUPERFAMILY Homeodomain-like 113 167 IPR009057 -
Accr3g00926 270 MobiDBLite consensus disorder prediction 40 58 - -
Accr3g00926 270 CDD SANT 117 162 IPR001005 -
Accr3g00926 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 114 166 IPR017930 -
Accr3g00926 270 SMART sant 114 164 IPR001005 -
Accr3g00926 270 PANTHER TRANSCRIPTION FACTOR KUA1 3 207 - -
Accr3g00926 270 Pfam Myb-like DNA-binding domain 117 160 IPR001005 -
Accr3g00926 270 ProSiteProfiles SANT domain profile. 118 166 IPR017884 -
Accr3g00926 270 SUPERFAMILY Formin homology 2 domain (FH2 domain) 45 54 - -
Accr3g00926 270 MobiDBLite consensus disorder prediction 83 110 - -
Accr3g00926 270 ProSiteProfiles Myb-like domain profile. 110 162 IPR001005 -
Accr3g00926 270 FunFam transcription factor MYB1R1 116 167 - -
Accr3g00926 270 NCBIfam myb-like DNA-binding domain, SHAQKYF class 113 165 IPR006447 GO:0003677
Accr3g00926 270 MobiDBLite consensus disorder prediction 37 62 - -
Accr3g00926 270 Gene3D - 116 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00926 Accr-Chr3 10339405 10340443 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr3g00926 Myb_DNA-binding 2.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00926 - - pcin:129304081 318.161