Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00922 ATGTCCAAAATGAAGCATCTACTGCGAAAGTTTCATATAGGTGGCGGGATCAATGAACCCCACAGGTTGCCTGATACCCACCCGGGGATCACTCCTAGTCCCGTCCCTAATCTCTCATCATCTTCGCCGACTTTGGCGTCGAATACAGTGGACACAGTCCGGCCAAGTGAATCGGTTGCTGATCGGACGGATATTGATGGCGCTGGTGGTATATGTGGCGACAAGGGAACCGGTTTTAATTTATTGGAGGAGGAGTTTCAATTGCAGTTGGCTTTAGCTATTAGCGCTTCCGATCCTGATGTCCGCAAGGACCCTGAGTCAGCCCAGATCGACGCCGCGAAGCAGATGAGCCTCGGCAGTGCAGCTTCTGTAACCGACACGGAAGGCCTCGTCCAGTTTCAATCGCTTCGTTATTGGAACTATAATGTCATTGATTATGAGGAGAAAGTGATGGATGGATTTTATGATTTAAATGGATTCTCCTCAAATTTGATTGAACGGGGAAAGATGCCATTGTTGGTCGATCTGCAAACTGCTTCCCTCTCTGAAAATGTTGGTTGCGAAGTGATTTTGGTGAATCGAATGGTTGATATTAAACTGAAACAGCTTGAGAAAAAAGCCTTTGCTGTATCCAAGGACTATTGCTTATCTGGACAAGGGCTAATTTCAAGTGGCTTGCTTCAGAAACTTGCTGATATTGTTGTTAATAGAATGGGTGGACCAGTTGGTGACCCTGACGAGATGATGAAAAAGTGGTCAGCTAGGAGTCACGAGTTACGTGATTCTTTGAGGACAATTGTTATTCCCCTTGGCTGTCTTGATGTTGGACTTTCTCGCCATCGAGCCCTACTTTTTAAGGTGATGGCTGATAGGATTAACGTTCCCTGCATGCTGGTCAAAGGGAGCCATTACACTGGCACTGATGATGGAGCTGTGAATTTGATTAAAGCTGATGATGGAAGTGAATACATTATTGATTTGATGGGTGCACCTGGTGCTCTTATTCCTACCGAAATCCCCAGTAGTCAGCTCCAAAACTACAGTTTTTCTGTAACAGGTTGTGCTGAGATTGCAGAATTACCTGACAATGCCCATCTCATACTTGATGGTGGAACTGGAGTGCTGGCAGTGTCAGCTGATATTCATAGAACATCAACAGTGGGCTGGGCTCAATCAGAACCATTATTGAATGTGGACAGTCAAGGAACAATGGATGCAAGGAACCAAGGTGGAATAAATCAAACAGAAAGATTTGAACTTGATTTGGGGAATCTTCTTCAGTCTGCACATATATCATGTGAAAGCACATCATATACAGATGCATCATCTGCAGAAAAGATGCAAGTAAAAAATACGTCAGAGTATTTCCTTAGTGCATCAAAGAACCCAGAATTTTCTCAGAAACTGCAAGATGGAAAAATTGTTGTTGGTGCTTTTCAATCTGATCCAAGCTTTGAGAAGTCCCACATATCATCTCAAGGGGTGTGCTCTGCCCATGATGTTAGATTCTGTCAATCTGCTGATTGGTTTGCTAAACAGAAAGAAGAACTGGAGCAAAGTGATGCCATGGCTGCAGACAAAGGACCTGTCAATTTGCTAAAGACGCAAGAAGAACAAGTTCTTGATTCTTCCTTGACCAAGGCAGCTGTTTCTTGGAAAAGGCAAATTGAGGTTGACTCGGTCTATGATGATGCAAATGGTATTGATAATAAAGTTGGAGTGGCTTTTAATTGCAATCAATTTGGGAATGATTCTGCAATTCAATTTAAAGAGGCAGATAACAGAGATAGCAGCCTAAATGATGGTAAAAGTGAGAAAGTTAAGTCAGTACTGGGCGCGGGTGCAGAATGGGAAATTCAATGGGAGGATCTTGATATTGGTGAGCGTATTGGCATAGGTTCTTATGGTGAGGTTTATCATGCTGACTTGAAGGGCACTGAAGTTGCTGTGAAGAAGTTTCTGAACCAAGACTTTTCTGGTGATGTGTTGGCTCAGTTCAGATCTGAAGTTGAGATCATGTTGAGGCTGCGACATCCAAATGTTGTACTTTTCATGGGAGCTATTACTCGGCCACCTCATTTTTCTATATTGACAGAGTTTCTTCCAAGAGGGAGTTTATATAGGCTATTGCATCGACCCAATTTTGAACTTGATGAGAAGAGGAGGCTGCGAATGGCTCTTGATGTGGCTAAGGGTATGAATTACTTGCACACAAGCCATCCTCCCATTGTTCATCGGGATTTGAAGTCTCCAAATCTTCTTGTTGACAAACACTGGGTTGTTAAGGTTTGTGATTTTGGTTTGTCACGTATGAAGCACCATACCTTTCTATCCTCAAAATCTTCTGCTGGAACGCCTGAGTGGATGGCGCCAGAAGTATTAAGAAATGAACCGGCCAATGAGAAGTGTGATGTGTATAGTTTTGGTGTAATTTTGTGGGAATTGGCTACTGCAAGGATTCCATGGAAAGGGTTGAACCCAATGCAGGTTGTTGGCGCCGTTGGATTCCAAAATAGACGGCTTGAAATTCCTGAAGATATTGATCCAGTGGTAGCCCAAATAATACGCGACTGTTGGCAAATGGAGCCACACATGCGGCCATCATTCTCACAGCTTATGTCCCGTCTCCGCCATCTTCAACATCTGATTGTGAAAGATAGGAGCTTAACGCAATAA 2676 0.4354 MSKMKHLLRKFHIGGGINEPHRLPDTHPGITPSPVPNLSSSSPTLASNTVDTVRPSESVADRTDIDGAGGICGDKGTGFNLLEEEFQLQLALAISASDPDVRKDPESAQIDAAKQMSLGSAASVTDTEGLVQFQSLRYWNYNVIDYEEKVMDGFYDLNGFSSNLIERGKMPLLVDLQTASLSENVGCEVILVNRMVDIKLKQLEKKAFAVSKDYCLSGQGLISSGLLQKLADIVVNRMGGPVGDPDEMMKKWSARSHELRDSLRTIVIPLGCLDVGLSRHRALLFKVMADRINVPCMLVKGSHYTGTDDGAVNLIKADDGSEYIIDLMGAPGALIPTEIPSSQLQNYSFSVTGCAEIAELPDNAHLILDGGTGVLAVSADIHRTSTVGWAQSEPLLNVDSQGTMDARNQGGINQTERFELDLGNLLQSAHISCESTSYTDASSAEKMQVKNTSEYFLSASKNPEFSQKLQDGKIVVGAFQSDPSFEKSHISSQGVCSAHDVRFCQSADWFAKQKEELEQSDAMAADKGPVNLLKTQEEQVLDSSLTKAAVSWKRQIEVDSVYDDANGIDNKVGVAFNCNQFGNDSAIQFKEADNRDSSLNDGKSEKVKSVLGAGAEWEIQWEDLDIGERIGIGSYGEVYHADLKGTEVAVKKFLNQDFSGDVLAQFRSEVEIMLRLRHPNVVLFMGAITRPPHFSILTEFLPRGSLYRLLHRPNFELDEKRRLRMALDVAKGMNYLHTSHPPIVHRDLKSPNLLVDKHWVVKVCDFGLSRMKHHTFLSSKSSAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELATARIPWKGLNPMQVVGAVGFQNRRLEIPEDIDPVVAQIIRDCWQMEPHMRPSFSQLMSRLRHLQHLIVKDRSLTQ 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00922 891 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 154 879 - -
Accr3g00922 891 Gene3D Phosphorylase Kinase; domain 1 617 701 - -
Accr3g00922 891 FunFam Serine/threonine-protein kinase CTR1 703 886 - -
Accr3g00922 891 Pfam Protein tyrosine and serine/threonine kinase 625 876 IPR001245 GO:0004672|GO:0006468
Accr3g00922 891 SUPERFAMILY Protein kinase-like (PK-like) 614 875 IPR011009 -
Accr3g00922 891 PRINTS Tyrosine kinase catalytic domain signature 737 755 IPR001245 GO:0004672|GO:0006468
Accr3g00922 891 PRINTS Tyrosine kinase catalytic domain signature 803 825 IPR001245 GO:0004672|GO:0006468
Accr3g00922 891 PRINTS Tyrosine kinase catalytic domain signature 698 711 IPR001245 GO:0004672|GO:0006468
Accr3g00922 891 PRINTS Tyrosine kinase catalytic domain signature 784 794 IPR001245 GO:0004672|GO:0006468
Accr3g00922 891 PRINTS Tyrosine kinase catalytic domain signature 847 869 IPR001245 GO:0004672|GO:0006468
Accr3g00922 891 MobiDBLite consensus disorder prediction 15 62 - -
Accr3g00922 891 ProSitePatterns Serine/Threonine protein kinases active-site signature. 743 755 IPR008271 GO:0004672|GO:0006468
Accr3g00922 891 ProSiteProfiles Protein kinase domain profile. 624 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00922 891 Gene3D Transferase(Phosphotransferase) domain 1 703 887 - -
Accr3g00922 891 MobiDBLite consensus disorder prediction 32 56 - -
Accr3g00922 891 ProSitePatterns Protein kinases ATP-binding region signature. 630 652 IPR017441 GO:0005524
Accr3g00922 891 CDD STKc_MAP3K-like 630 876 - -
Accr3g00922 891 FunFam Serine/threonine-protein kinase isoform 1 615 702 - -
Accr3g00922 891 SMART serkin_6 624 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00922 891 Pfam Ethylene-responsive protein kinase Le-CTR1 132 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00922 Accr-Chr3 10293548 10310746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00922 1 890 MAP Kinase Kinase Kinase AT5G11850 55.017 0.0 930
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Accr3g00922 PK_Tyr_Ser-Thr 9.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00922 K04424 - qsa:O6P43_015906 1091.64