Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00914 ATGATGAAAGGTTTGGTGGCCGATGAGAATATGTCGAATTTGACATGTGCATCTAGTGAAATAAGCGGTTCTTCTGGGACCAGAAATGATACTCCTGTCTCTCTTTATCCTCACAACCAGTACTCCTCCACTTCAGCAATTCAAGAACCACAACCGAAAAAGAAGAGAAACCTTCCGGGCAATCCAGACCCAGACGCTGAAGTAGTAGCCCTGTCTCCAAAGACCCTCTTGGCAACAAACCGGTTCTTCTGTGAGATATGCAACAAAGGGTTTCGGAGAGACCAAAATCTGCAGCTTCACAGAAGAGGGCACAACTTGCCATGGAAGCTGAAGCAAAGAAACAACAAAGAAGTGATTAAGAAGAAGGTGTATGTGTGCCCGGAGGTGACGTGTGTTCACCATGACCCCTCAAGGGCCCTCGGAGACCTCACCGGCATCAAGAAGCACTTCTGCAGGAAGCACGGCGAGAAAAAATGGAAGTGTGAAAAATGCTCCAAACGTTACGCTGTTCAGTCTGACTGGAAGGCTCACTCTAAAATTTGTGGCACCAAGGAGTACAAATGTGATTGCGGAACCATCTTCTCTAGAAGGGACAGTTTCATAACACACAGAGCCTTCTGTGATGCTTTAGCACAGGAGAGTGTAAGATCAGTCACGGCAGTGAACCCTCTTCTTCATAGCCATCCCCTCCAAGCTCCACCTCCATTATTACTCTCCAAGAAACAACAAGATAACTTTCCACCATGGCTGGGAGGAGAATCTGCTGCAACTACTGGAGGAAACATTCTCATGAGGCATTTAATGTCATCCTCACATCTAGACCAGTCCTTAAACTTAATCCACCAAAACCCTAATAATAACCCCATAACACCTTCCCTTCCTCGTTTCCAATCCCCAGCTTCCTCTCCTTACATGTCAGCCACTGCTTTGTTGCAGAAAGCATCACAAATAGGTCACATGCCTCAATCTGATCCTCAATGTACCACCATTATGCTCAATTCACCATCTTCTTCAGGTGTTTCTGGTTTGGGTATGCCTTCACGTGACGACCAGATACTAATGGGGTTGCCTCATCCCTTGGCTTCTTATGGGAATAAAGCTGCTGATGGTTTTGTTGCCTCTGATAATTACTTAGAAGATGGTGCAACTCCACCTAATAATACTACTTCTCTTTTCCATGACATGATGGTTAATAATAGTAATACCGCTTCTTCTGCTAATAATAATGCCTTTGATGTGAGGTCGTCGTCTTCTTCCTTCGAGGATGCTTTGAGAGGAATGCTGAATAGTAATCCAACAAGAGATCACACTACTGCAGCTGCTAGCGATGAAATGACCAGAGATTTTTTGGGACTCAAGGCATTTTCTCAGAAAGATTTTTTCAACATATCGGGACTTGACCATTTGGGTTCTTCGACGTCGTATGGTAAGCAAAGTCGCAACCAAACACCTTGGCAAGGCTAA 1464 0.4495 MMKGLVADENMSNLTCASSEISGSSGTRNDTPVSLYPHNQYSSTSAIQEPQPKKKRNLPGNPDPDAEVVALSPKTLLATNRFFCEICNKGFRRDQNLQLHRRGHNLPWKLKQRNNKEVIKKKVYVCPEVTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKICGTKEYKCDCGTIFSRRDSFITHRAFCDALAQESVRSVTAVNPLLHSHPLQAPPPLLLSKKQQDNFPPWLGGESAATTGGNILMRHLMSSSHLDQSLNLIHQNPNNNPITPSLPRFQSPASSPYMSATALLQKASQIGHMPQSDPQCTTIMLNSPSSSGVSGLGMPSRDDQILMGLPHPLASYGNKAADGFVASDNYLEDGATPPNNTTSLFHDMMVNNSNTASSANNNAFDVRSSSSSFEDALRGMLNSNPTRDHTTAAASDEMTRDFLGLKAFSQKDFFNISGLDHLGSSTSYGKQSRNQTPWQG 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00914 487 Gene3D Classic Zinc Finger 61 132 - -
Accr3g00914 487 ProSitePatterns Zinc finger C2H2 type domain signature. 84 104 IPR013087 -
Accr3g00914 487 MobiDBLite consensus disorder prediction 18 66 - -
Accr3g00914 487 FunFam protein indeterminate-domain 12-like 61 130 - -
Accr3g00914 487 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 39 458 IPR031140 -
Accr3g00914 487 MobiDBLite consensus disorder prediction 468 487 - -
Accr3g00914 487 MobiDBLite consensus disorder prediction 18 51 - -
Accr3g00914 487 SUPERFAMILY beta-beta-alpha zinc fingers 81 179 IPR036236 -
Accr3g00914 487 ProSiteProfiles Zinc finger C2H2 type domain profile. 82 104 IPR013087 -
Accr3g00914 487 SMART c2h2final6 82 104 IPR013087 -
Accr3g00914 487 SMART c2h2final6 159 179 IPR013087 -
Accr3g00914 487 SMART c2h2final6 124 154 IPR013087 -
Accr3g00914 487 FunFam protein indeterminate-domain 5, chloroplastic-like 137 216 - -
Accr3g00914 487 Pfam Zinc-finger double-stranded RNA-binding 82 104 IPR022755 -
Accr3g00914 487 Gene3D Classic Zinc Finger 137 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00914 Accr-Chr3 10171621 10173697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00914 8 325 IDZ Gene Family AT1G55110 54.598 1.04e-115 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr3g00914 zf-C2H2_jaz 4.6e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00914 K25870 - tcc:18588073 510.375