Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00900 ATGTCACTCCACCAGCCATTTGACGGCACAGCTCTGCCTCTAAACACCACCGTCGTGGCCGTCGACAGAGGCAAGAACAGTGTATATGCCTTCCGGTGGGCACTTAATCATCTTCATAGTGCAGTCTTCGTCGCTCTCCACGTTAGGTCAAAACAAATTCCACCCCATGAGGGCCTCCTCAAGGTTTTCCCACCTGACGAAAGCGATGTAGCCCATGTTTTCTCTGCATTACGAGAATTTCATCCACATAAGGCGGTGACGATAAAAGAAGCCGTAGTTGATGATAGTGATGTTGTGAAAGGAATTTCAGCATTTGCAAACAAGCATCACATCGGCAGTATCGTTATCGGCGCAACGGCTAGCTTGAATTCTCTGGCAAGGAAATTTATAGGCTTTGATTTGCCGACGGCCATAATCAAATCAGCTTCAGATTATACTTCTGTGTACATAATTTCAAAAGGGAAGATAGTCTCAGCTCGATCAGCCCTACGTCCTATGTCAAACATTTGTGTCCGTTCAAAACAACCGAAGGCACTTCAACAAAATGATGTAGAAAACGGAGTAAGGGAACAGGCAGCTAAAACAGGAGGGATAACAGAGGGATCAGAAAGAACGTCTTCTGAGAGAAACAAGAATGGAGAAATGCACAAGAGTACTGACGTTTCGTCGATGGATAAACTAGACCTATCCAATCGTGGGTTAAAGGCATCGGTTAGCGTTGATTCCTTTTCGGACGAAAGTGTTTCGTCAGATCCAACTAAACAAGATTTGGAGTTTATCTTTTCATCTGATGGCTTCAGGACTTCATCACCTTCCCAGCCCTCAAAAGAATTAGGAGCTCAAATGAAGAGATTGAGGCTTGAACTGAAGCAAACCATGGACATGTACAGCTCAGCTTGCAAAGAGGCAGTATCAGCAAAAAATAAGGCCAACGAGATTAATCAATGGAAACTAGAGGAGGCACGTAAACTTGAGGAAGCTATAATGTCAGGAGAGGCAGCTCTTGCACTAGTAGAAAAGGAGAAGGCTAGAGCCCGAGCTGCCCTAGAAGAAGCTGAGGAAGCCAAGAAAATGGCTGAGAAGGAAGCAGGGAGAAGGAGATATGCAGAGCGAAAGGCCAGGAAAGAGGCAGAAGAAAAGGACAGAGCCCTAACTGCTTTGGCTAAAAACGATGTTCGATATAGGAAATACACTATACAAGAGATCGAATGGGCTACTCAAAAGTTCTCCCCATCCTTCAAAATAGGCGAAGGTGGATATGGGCCTGTGTTTAAAGGTGACCTTGATCTCACCCCTGTTGCGATCAAACTCTTAAGACCTGATGCTTCTCAAGGAAGAAAGCAGTTTCACCAAGAGGTTGAGGTATTATGCTGCATCAAACATCCTAATATGGTCCTCCTCCTTGGTGCCTGTCCTGAGTTTGGCTGTCTGGTTTATGAATACATGGAAAATGGTAGCTTGGAGGACAGATTATTTCGGAAGAACAATAGCCCACCTCTTTCATGGAGGTTAAGGTTCACAATAGCTGCTGAAATTGCAACTGCACTTCTTTTCCTTCACCAAAGCAAGCCAGAACCAGTTGTGCACCGGGACCTAAAACCAGCAAACATCCTCCTAGACCGGAATTATGTGAGTAAAATCAGTGATGTGGGCCTGGCACGATTGGTTCCGGCTTCTGTAGCTGATTCGGTCACACAATATTACATGACTTCAGCTGCCGGAACCATTTGCTATATTGATCCTGAGTACCAACAAACAGGGAAGTTAACAACTAAATCAGATATATATTCACTAGGAGTAATGCTGCTACAAATTATCACAGCCAAGCCTCCCATGGGTCTTGCTCACCATGTGAAAAGGGCGATGGAAAGGGGAAAATTTGCAGAGATGCTTGATCCTACAGTGACTGATTGGCCAGTTGAAGAGGCTCTAGCATTTGCCAAAGTGGCAGTGAGTTGTGCAGAGCTTAGCAAGAAGGACAGGCCAGACCTTGCAACAGTTGTTGTGCCAGAGCTTAAACGCTTAAGGAATTTTGGCTGCACGTCTCACCCTAGTCCTATTGTCATCAACAATCAGAGTCATAGTCGAGCGGGACACTCTCCTAGTCCTAGAACTCCACGAAATTCATGA 2130 0.4526 MSLHQPFDGTALPLNTTVVAVDRGKNSVYAFRWALNHLHSAVFVALHVRSKQIPPHEGLLKVFPPDESDVAHVFSALREFHPHKAVTIKEAVVDDSDVVKGISAFANKHHIGSIVIGATASLNSLARKFIGFDLPTAIIKSASDYTSVYIISKGKIVSARSALRPMSNICVRSKQPKALQQNDVENGVREQAAKTGGITEGSERTSSERNKNGEMHKSTDVSSMDKLDLSNRGLKASVSVDSFSDESVSSDPTKQDLEFIFSSDGFRTSSPSQPSKELGAQMKRLRLELKQTMDMYSSACKEAVSAKNKANEINQWKLEEARKLEEAIMSGEAALALVEKEKARARAALEEAEEAKKMAEKEAGRRRYAERKARKEAEEKDRALTALAKNDVRYRKYTIQEIEWATQKFSPSFKIGEGGYGPVFKGDLDLTPVAIKLLRPDASQGRKQFHQEVEVLCCIKHPNMVLLLGACPEFGCLVYEYMENGSLEDRLFRKNNSPPLSWRLRFTIAAEIATALLFLHQSKPEPVVHRDLKPANILLDRNYVSKISDVGLARLVPASVADSVTQYYMTSAAGTICYIDPEYQQTGKLTTKSDIYSLGVMLLQIITAKPPMGLAHHVKRAMERGKFAEMLDPTVTDWPVEEALAFAKVAVSCAELSKKDRPDLATVVVPELKRLRNFGCTSHPSPIVINNQSHSRAGHSPSPRTPRNS 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00900 709 MobiDBLite consensus disorder prediction 174 188 - -
Accr3g00900 709 FunFam U-box domain-containing protein 51 482 682 - -
Accr3g00900 709 SUPERFAMILY Protein kinase-like (PK-like) 393 668 IPR011009 -
Accr3g00900 709 Coils Coil 321 365 - -
Accr3g00900 709 Pfam Protein tyrosine and serine/threonine kinase 414 668 IPR001245 GO:0004672|GO:0006468
Accr3g00900 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Accr3g00900 709 PANTHER OS02G0152300 PROTEIN 18 692 - -
Accr3g00900 709 MobiDBLite consensus disorder prediction 204 223 - -
Accr3g00900 709 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 120 - -
Accr3g00900 709 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 382 481 - -
Accr3g00900 709 ProSiteProfiles Protein kinase domain profile. 409 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00900 709 Gene3D Transferase(Phosphotransferase) domain 1 482 682 - -
Accr3g00900 709 Pfam Universal stress protein family 18 130 IPR006016 -
Accr3g00900 709 SMART serkin_6 409 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00900 709 MobiDBLite consensus disorder prediction 174 225 - -
Accr3g00900 709 Gene3D HUPs 15 144 IPR014729 -
Accr3g00900 709 Gene3D Phosphorylase Kinase; domain 1 379 481 - -
Accr3g00900 709 MobiDBLite consensus disorder prediction 686 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00900 Accr-Chr3 10033722 10037224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00900 88 684 Receptor kinase-like Gene Family AT5G12000 59.385 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Accr3g00900 PK_Tyr_Ser-Thr 9.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00900 - - qsa:O6P43_015879 764.222