Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00893 ATGGCAGACAGTAATCCTCCGAAACCACCAGATTCACCAGAGAGCGATTTCACAAACCAGAATCCTTTTGATGAGTTCTCTGAATTCTTCATCTTCGAGGATGATGATGAGGAACCTGACCATTCAATGATGAGTTCTGAACAAGTCCCCAATCAGCAGGTCTCTCAAAGCATTGAAGTAAGCGGATTTGGAGGAAGCACTAGCAACCCTTTCGAGGGCGGGTCTTCTAGTAGTAGAGACATTAGCGGTAGTGGGGAGAGAGACGTCAAAGACAGATTTGCGTTCAAGACAAAGTCGGAGGTAGAGATACTGGAAGATGGGTACAAGTGGAGAAAGTATGGCAAGAAGATGGTCAAGAACAGCCCCAACCCCAGGAATTACTATAAGTGTTCGGTGGAGGGATGCCCGGTGAAAAAGAGAGTTGAGAGAGATAAGGACGATCCAAGTTTTGTTATAACAACCTACGAGGGTGTCCACACCCACCCAAGCGTTAGCTAG 498 0.4679 MADSNPPKPPDSPESDFTNQNPFDEFSEFFIFEDDDEEPDHSMMSSEQVPNQQVSQSIEVSGFGGSTSNPFEGGSSSSRDISGSGERDVKDRFAFKTKSEVEILEDGYKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDKDDPSFVITTYEGVHTHPSVS 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00893 165 Pfam WRKY DNA -binding domain 105 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g00893 165 ProSiteProfiles WRKY domain profile. 99 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g00893 165 MobiDBLite consensus disorder prediction 44 82 - -
Accr3g00893 165 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 23 162 IPR044810 GO:0003700
Accr3g00893 165 SUPERFAMILY WRKY DNA-binding domain 97 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr3g00893 165 Gene3D WRKY domain 91 157 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr3g00893 165 MobiDBLite consensus disorder prediction 1 87 - -
Accr3g00893 165 FunFam WRKY transcription factor 57 90 164 - -
Accr3g00893 165 SMART WRKY_cls 104 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00893 Accr-Chr3 9986175 9986937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00893 92 164 WRKY Transcription Factor Family AT5G26170 83.562 8.09e-44 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr3g00893 WRKY 1.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00893 - - gmx:100819462 182.956