Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00890 ATGAGTTTAGGTACAGCTGAGGACGATTCAGCTTCAGAAATTCACATCCCAGCAGAAATAGACTGGCACATGCTTGACAAATCCAAATTCTTCTTCTTAGGCGCCGCCTTATTTTCCGGTGTATCTACTGCCCTTTATCCTATTATTGTGCTGAAGACCCGCCAGCAGGTTTGTTCTTCTCAAATTTCTTGCTTCCAGATGTCTTTTTCCATCATGCGCTATGAAGGCTTTAGAGGGTTTTACAAAGGTTTTGGTACCTCTTTGACTGGAACAATCCCTGCTCGAGCGCTTTACATGGGCGCACTTGAAATCACCAAGAGCAATGTTGGCTCTGCTATTGCTGGTTTGGGGTTTTCAGAAACCACCGCCACCGCCATAGGTAATGCAGCTGCAGGAGTGAGTTCTGCCATGGCAGCACAATTAGTTTGGACCCCAGTCGATGTTGTGAGTCAAAGACTCATGGTTTGTGGTTGCAAGAACATGCTCCCCAGTGTTGATTGTGGGAATTACAGGAATGGTTTTGATGCCTTTAGGAAAATTCTTTGCACCGATGGACTGCGAGGTTTATATAGAGGATTTGGGATTTCCATATTGACTTATGCACCATCCAATGCTGTGTGGTGGACTTCTTACTCTATGGTCCATAGGCTCATATGGGGTGCTTTTGGTTGCCATATGGGTAAGAAGGATGATAACAAATTGGCCAGTGGCCATGGTTTTAGGCCTGATTCCAAGGCTATGGTTGCAGTGCAAGGGCTAAGTGCAGTTGTGGCGAGTGGGGTTTCGGCTATTATAACTATGCCATTTGACACCATCAAGACAAGGTTGCAGGTTTTGGATGCAGAGGAGAATGGAAGAAGGAAGCCATTAACTGCTATGCAGACTGTTAGGCATCTGATGAAGGAAGGTGGCTTTAGTGCTTGTTACAGAGGACTGGGACCACGGTGGGCTTCAATGTCCATGTCTGCAACAACCATGATTACTACCTACGAGTTTTTGAAACGAATGTCTACCAAGAGGCAAGAGAACTTATCTGTATAA 1041 0.4553 MSLGTAEDDSASEIHIPAEIDWHMLDKSKFFFLGAALFSGVSTALYPIIVLKTRQQVCSSQISCFQMSFSIMRYEGFRGFYKGFGTSLTGTIPARALYMGALEITKSNVGSAIAGLGFSETTATAIGNAAAGVSSAMAAQLVWTPVDVVSQRLMVCGCKNMLPSVDCGNYRNGFDAFRKILCTDGLRGLYRGFGISILTYAPSNAVWWTSYSMVHRLIWGAFGCHMGKKDDNKLASGHGFRPDSKAMVAVQGLSAVVASGVSAIITMPFDTIKTRLQVLDAEENGRRKPLTAMQTVRHLMKEGGFSACYRGLGPRWASMSMSATTMITTYEFLKRMSTKRQENLSV 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00890 346 PRINTS Mitochondrial carrier protein signature 190 208 IPR002067 GO:0055085
Accr3g00890 346 PRINTS Mitochondrial carrier protein signature 255 277 IPR002067 GO:0055085
Accr3g00890 346 PRINTS Mitochondrial carrier protein signature 43 57 IPR002067 GO:0055085
Accr3g00890 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Accr3g00890 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 217 IPR018108 -
Accr3g00890 346 SUPERFAMILY Mitochondrial carrier 23 333 IPR023395 -
Accr3g00890 346 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 10 342 - -
Accr3g00890 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 246 336 IPR018108 -
Accr3g00890 346 Pfam Mitochondrial carrier protein 36 108 IPR018108 -
Accr3g00890 346 Pfam Mitochondrial carrier protein 124 219 IPR018108 -
Accr3g00890 346 Pfam Mitochondrial carrier protein 249 339 IPR018108 -
Accr3g00890 346 Gene3D Mitochondrial carrier domain 29 345 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00890 Accr-Chr3 9939568 9940608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00890 1 342 Chloroplast and Mitochondria Gene Families AT1G72820 66.377 3.07e-166 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00890 K15121 - qsa:O6P43_015862 540.806