Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00885 ATGAACACGAGTTTCGGAGACAGTCCTCAAATTATGCAGAGTTTAGCTTCGCCACGCCTGTCTCGGCAATCATCTAAAGCGAGTAGCAAGCATAAGCAATTATCGGAGGCATCAAGCCCTGTTCCTAGTGGATGCTGTCGAGGTTTCGGTAATGTCAAGACCACGGGACCAACCATGTCAGCCATGCAATACCAGCTGCAGCTCCAAGATTCCAAGAGATTGGAAGGAAAGGTGGCAGATTTGGAGAAAGAAGTGCAGAGGCAGAAAGAGCTGCGAGTGATGTATAGGAAAAGGATGGAAAGAACACAGGACTATCTAAGATACTGCCTCCAAATAGCACAAGAGAATGGTATATTGGACCTCATCACCCAGTCCAAAGGCGACCTCCAACAATCCCCTTTATCAGTCCACACCGTCAACTCCGCCGCCAGTCCTCAGATTCCCTCTCCCATCCACCGCCACCCTGATCTCGCAGCCATCATTGAACAAGCCAAAATCCAAGGATGGCACATTGATCCTACTGAGGTTCAATTGGAGGAGAAGATAGGACAGGGAAGCACGGCGGAGATATACAGAGCAACTTGGCGAGGATATGATGTGGCGGTGAAGTGCTTATCTGCTGATTTTTTCAGGACAAACGCAAACGGCGTCGTATTTTTTGCACAAGAGGTGGAGACCCTGTCGAGGCAGAGGCACAGGTTTGTGCTTCAGCTGATGGGGGCATGCCTAGAGCCTCCGCACCACGCCTGGGTGGTCACCGAGCACGTCAGCACTAACCTCAAAGACTGGCTTCACGGCGCGGGCAAGAGAAGCAGAGTCAGGCAGGTCCCACTTCCTTCCCTGAAGGACAGAGTGATGAGGGCTCTGGAGATCGGTCAAGCCATGCAGTATCTGCACGAACAAAAGCCCAAGATCATCCACCGTGACCTCAAACCCAGCAACATTTTCTTGGACGACGCCCTCCACGTCAGAATCGCCGATTTCGGCCACGCCCGCTTCTTGGCTGACCATGAAATGGCCCTCACCGGCGAAACAGGAACGTACGTGTACATGGCACCGGAGGTGATTCGATGCGAGCCTTACAATGAAAAGTGTGACATATACAGTTTTGGGGTGATACTAAACGAGCTTCTGACCGGAAATTACCCTTACATTGAAACAGACTACAGTCCTACCAAGATTGCGGCGGAAGTGGTGGAGGGAAACCTGAGACCGACGGTTCCGGAGGATACAGGAGGGGAATTGGAGGAGCTGGTGCAAGTGATCAGACTGTGTTGGGATGGGAATCCAACGATGAGACCTTCATTCGCAAGCATCACTAATACCCTCAAAGCCTACATCAAGAGGGCCTCTTCAAGTCCCTGA 1365 0.5165 MNTSFGDSPQIMQSLASPRLSRQSSKASSKHKQLSEASSPVPSGCCRGFGNVKTTGPTMSAMQYQLQLQDSKRLEGKVADLEKEVQRQKELRVMYRKRMERTQDYLRYCLQIAQENGILDLITQSKGDLQQSPLSVHTVNSAASPQIPSPIHRHPDLAAIIEQAKIQGWHIDPTEVQLEEKIGQGSTAEIYRATWRGYDVAVKCLSADFFRTNANGVVFFAQEVETLSRQRHRFVLQLMGACLEPPHHAWVVTEHVSTNLKDWLHGAGKRSRVRQVPLPSLKDRVMRALEIGQAMQYLHEQKPKIIHRDLKPSNIFLDDALHVRIADFGHARFLADHEMALTGETGTYVYMAPEVIRCEPYNEKCDIYSFGVILNELLTGNYPYIETDYSPTKIAAEVVEGNLRPTVPEDTGGELEELVQVIRLCWDGNPTMRPSFASITNTLKAYIKRASSSP 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00885 454 CDD STKc_MAP3K-like 182 443 - -
Accr3g00885 454 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 70 445 - -
Accr3g00885 454 MobiDBLite consensus disorder prediction 1 48 - -
Accr3g00885 454 Pfam Protein kinase domain 177 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00885 454 ProSiteProfiles Protein kinase domain profile. 176 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00885 454 Gene3D Transferase(Phosphotransferase) domain 1 273 453 - -
Accr3g00885 454 Coils Coil 64 98 - -
Accr3g00885 454 Gene3D Phosphorylase Kinase; domain 1 164 256 - -
Accr3g00885 454 SMART serkin_6 176 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00885 454 ProSitePatterns Protein kinases ATP-binding region signature. 182 203 IPR017441 GO:0005524
Accr3g00885 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Accr3g00885 454 SUPERFAMILY Protein kinase-like (PK-like) 158 442 IPR011009 -
Accr3g00885 454 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00885 Accr-Chr3 9900787 9902693 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00885 169 448 MAP Kinase Kinase Kinase AT4G35780 36.071 2.02e-53 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Accr3g00885 Pkinase 5.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00885 - - pcin:129302127 772.311