Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00882 ATGAGGAGGAGTTCAAGTTGTCCTGGGGAAGTAGAAGGACTGAACAGAGGAGCGTGGACTGCTCCAGAGGACAAGTTGCTCACTTCTTACATTATGCTCCACGGCGAAGGCAAGTGGAGCCACGTCCCTAAAAGAGCTGGCTTGAATAGAAGTGGCAAAAGCTGTAGGCTTCGATGGCTGAACTATCTCAGGCCTGATATTAAGAGAGGCAACATCACCCAAGACGAAGAAGACCTAATTATTAGACTTCATAAACTTCTTGGTAACAGATGGTCTCTTATAGCTGGAAGGCTACCTGGAAGAACAGACAATGAGATCAAGAACTACTGGAACACTACTTTGGGAAGGAAGCTTAGAACACAATCAGGCGCAACGACGTCGTCTCAACAACATGCGTCCACCAAATCAAGCCAGTCTGATGATATCACTCGACCACTACAAGTGATCCAAACGAAGGCCGTCAGATGCAAAAACGTGGTTATCCAACATCCACCACCCAATTGTCCTGAGGAAACGACGTCGTCCACCGTCAACTCTCTAGCTTCTTCCGACCAGTTAGGTCTGGATGAAGCCCACCTAGCTCCCCAGTTCTCGGACCAGTTTCTGGAGGCCGATGTACATGAATATGTGAAATTTTCGGGCCCTGAACGTAATGATGAGTTACATGGTGAACTGAATGGAATAGATTTTTTCAGAGAGTTTAACGTGGACAATAGCATGGCCAGGGCCATGAATGCTCAAGCAGACGAGTTCTCACCTATCGACGAACTTATTGGCAATTGTGGGACAGCTGATGGATTCAGGAACATTGGCTCTATGGATCTGGATTTAATGACATTCATGCTGGATTAG 852 0.4683 MRRSSSCPGEVEGLNRGAWTAPEDKLLTSYIMLHGEGKWSHVPKRAGLNRSGKSCRLRWLNYLRPDIKRGNITQDEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTTLGRKLRTQSGATTSSQQHASTKSSQSDDITRPLQVIQTKAVRCKNVVIQHPPPNCPEETTSSTVNSLASSDQLGLDEAHLAPQFSDQFLEADVHEYVKFSGPERNDELHGELNGIDFFREFNVDNSMARAMNAQADEFSPIDELIGNCGTADGFRNIGSMDLDLMTFMLD 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00882 283 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Accr3g00882 283 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 176 - -
Accr3g00882 283 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Accr3g00882 283 Gene3D - 71 144 - -
Accr3g00882 283 CDD SANT 73 114 IPR001005 -
Accr3g00882 283 FunFam Transcription factor TT2 72 142 - -
Accr3g00882 283 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Accr3g00882 283 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Accr3g00882 283 MobiDBLite consensus disorder prediction 120 143 - -
Accr3g00882 283 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Accr3g00882 283 CDD SANT 18 63 IPR001005 -
Accr3g00882 283 SMART sant 15 65 IPR001005 -
Accr3g00882 283 SMART sant 68 116 IPR001005 -
Accr3g00882 283 FunFam MYB-related transcription factor 15 68 - -
Accr3g00882 283 Gene3D - 16 68 - -
Accr3g00882 283 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Accr3g00882 283 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 63 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00882 Accr-Chr3 9838554 9839637 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00882 1 223 MYB Transcription Factor Family AT4G38620 44.348 3.15e-54 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr3g00882 Myb_DNA-binding 5.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00882 K09422 - qsu:112010882 233.417