Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00859 ATGGCTGATTCCGACCTCACTCTGAGAACTACCACCGACTCCTGCAAGTACAAGGGCGTCAGAAAGCGAAAATGGGGCAAATGGGTGTCCGAAATCAGACTTCCCAACAGCCGCGAGCGCATTTGGCTCGGTTCCTTTGATTCGCCGGAGAAGGCCGCTCGAGCCTTTGACGCCGCCCTATATTGCCTCCGCGGCCCGAATGCCAGCTTCAACTTCCCTGACACGCCTTTGGAGTTGGACAATATCACTGTCCCCGCTGATCATCATCGTCAATCTCGTTCTCAAGAAATCCAAGAGCTCGCCTCTAAGTTTGCCAACGAATACCAGCGGGACCCACCAATAATGCTTCAGCAATCTTCAGAAACAGCAGCTCCTTCTTCATGCGAATCAGATAGGGTTGCCGAGAGTGGTTATCCGGTGGAGGTGGACAACGGGGTCGGGGACATAAGGGGCATTAACGACTGGTCGTTTTTGAAGTCACTGGATGAGATTGACTCCGCCAATAATAGTAACCATAATTATAATGGTTTCGACTCTGGATTCGACAAGATGCACTCTGGTGAGTTATTGTTTCCCACATCACCGCCTCATTTGCTCGTTGATTATCATGGTAGTGACAATAATGGCCACGCTATGGAATGCGATGACGCTTTTTCCCAACAATCATTGTTCCTTTGGAACTTTTGA 687 0.4978 MADSDLTLRTTTDSCKYKGVRKRKWGKWVSEIRLPNSRERIWLGSFDSPEKAARAFDAALYCLRGPNASFNFPDTPLELDNITVPADHHRQSRSQEIQELASKFANEYQRDPPIMLQQSSETAAPSSCESDRVAESGYPVEVDNGVGDIRGINDWSFLKSLDEIDSANNSNHNYNGFDSGFDKMHSGELLFPTSPPHLLVDYHGSDNNGHAMECDDAFSQQSLFLWNF 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00859 228 ProSiteProfiles AP2/ERF domain profile. 16 73 IPR001471 GO:0003700|GO:0006355
Accr3g00859 228 CDD AP2 15 75 IPR001471 GO:0003700|GO:0006355
Accr3g00859 228 SMART rav1_2 16 79 IPR001471 GO:0003700|GO:0006355
Accr3g00859 228 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 14 159 - -
Accr3g00859 228 Gene3D AP2/ERF domain 15 74 IPR036955 GO:0003700|GO:0006355
Accr3g00859 228 FunFam Ethylene-responsive transcription factor 2 15 74 - -
Accr3g00859 228 Pfam AP2 domain 15 65 IPR001471 GO:0003700|GO:0006355
Accr3g00859 228 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Accr3g00859 228 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Accr3g00859 228 SUPERFAMILY DNA-binding domain 16 74 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00859 Accr-Chr3 9524332 9525018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00859 10 228 AP2-EREBP Transcription Factor Family AT1G19210 42.222 2.48e-42 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr3g00859 AP2 4.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00859 - - pcin:129301731 262.307