Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00853 ATGGTTTGTGAGATGGAGCATGACCTTATGGAGGACATGGACATAGAAGTCCTCCCTTCAATGTGGCCAGAAGATATTGGAACTGATGCTGGGAAACAGTTCAACATAGAGAAGCCTGGGAGTGACCAAGACATGTTAGAGGAGGTCACAATAGTGGAGGAGCCAACTATAGTAGATTTCAAGCGTCTCATGGAGCTCACTAACTATACAGACAGAGGGTCAACTCAGTTGACCTATTTCATGAAGTACTTGGAGTACAAGCAGGCTAATGCCGTGCGTCTCCTGCGAGAAGAACTCGACAACCTAAGCAAACAAAGACAGGAAGTTGAGCTGAGGAAGTTGAAGATATTGGAAGAGCACCGGTTCGAGGACATAAGATATGGGGATGATAAAAGACCAGTTTCTATATTGGATGAAGTTTATGACATATGGCAAGATAGGCCTCGCAGGAAAAATGATGTTGTTGTTCAGAACAAGGGCATTGAAATAGATGCTGAGTATGATACTGTTGTGTACTGGAAGCAAAGGGCCCTGCATTTGGAAAAATTGTTGGAGGCAAGTATTCAGAGAGAGCAGACACTTATTGAGAAGCTGGAAGAAAGCATAAAGAATCTTGAGAGACAGTCCACTCCTGTAGAAGAATTGTCACAGATTCTGAAAAGAGCAGATAATTTCTTGCATTTTATTCTCCAGAATGCACCTATTGTCATAGGCCATCAGGACAAAGAGTTGCGCTATCGCTTTATCTATAACCATTTCCCAAGATTGCAAGAGGAGGACATCATAGGAAGAACAGACGTGGAAATTTTTACGGGGTCTGGAGTTAGGGAATCTCAAGATTTTAAGAGAGAAGTTCTGGAAAAAGGATTGCCTGCAAAAAGGGAAATTACTTTTGAGACAGAACTATTTGGATCAAAGACATTCTTAATTTATGTAGAACCTGTCTTTAGCAAAGCAGGGGAGACAATTGGGATAAATTACATGGGAATGGATGTAACAGATCAGGTGAGAAAAAGAGAGAGAATGGCACGGATTAGGGAAGAGATTGCAGTTCAGAAAGCAAAGGAGACTGAATTAAATAAGACCATTCACATTACAGAGGAAACTATGCGAGCAAAACAAATGCTAGCAACCATGTCCCATGAAATAAGATCTCCACTATCTGGCGTTGTTAGCATGGCTGAGATTCTTTCTACTACAAAACTTGACAAGGAGCAAAGACAGCTCTTGGAAGTCATGCTTTCCTCAGGAGATTTGGTTCTTCAACTTATAAATGACATATTAGATCTTTCCAAGGTTGAGTCAGGAGCCATGAAGTTGGAAGCTACCAAATTCCGTCCAAGAGAGGTAGTGAAGCATGTACTACAGACTGCTGCAGCATCATTGCAGAAAATATTAACCCTAGAAGGTCATGTGGCTGATGATGTTCCTATTGAGGTCATTGGAGATGTTTTAAGGATTCGGCAAATTCTCACAAACCTCGTAAGCAATGCAATCAAGTTTACCCATGAAGGTAAAGTTGGCATAAATCTCTCCGTTGTAGCACGGCCCAATTTTGGACAATCAGAAGATGGTCAGCAAAAGATTAGTGGAGACAAGTCAAATGTATCAGTGAGTGGACTATCAGAAGAGAAATACTTCTCAGCATCTCAAAATGGGAGTAGTGATGAATGTAGATCCCCCGTTAAAAGCGAACGCTCAAGGAATGGGGCTACAGAGGAGCAACCTCATTCAACCGAAACTACAGTGTGCATACGTTGTGATGTATATGACACTGGAATTGGAATACCAGAAAAAGCAATTCCTACTTTATTTAAAAGATACATGCAAGTCAGTGCAGATCACGCTCGAAAGTATGGTGGCACAGGGCTAGGACTAGCAATATGCAAACAACTGGTCGAATTAATGGGTGGTCGTCTAACAGTGTCAAGCAAAGAACACTGTGGTTCTACATTTACGTTCATACTCCCGTACAAGGTTTCTATTGCTTGTGATAATTCAGATGACCCCGACGACAAGCTCTCAGATATGGAGAAAGACGACGCTGCTTCTGATGACGCCACACAAGGATTCTTCCAATTCCAACCACGTACATTGGGCTCACTTTTCTCCTCCAACGGATCTACCAGAGCCTCAACGTTGAGACCCCAAAAACTTGGGCTCGCACTCCCTCATAACTTGAATGGGTTTTCGCAGAATTCTTGCTCTCTCCCCTCTAACGACGTCACTTCAAATGGAACAACTTCAGTTGAAGATGTAATACGAGTGACGACGGTAACGGACTCGCCGGAGATGTCTGAATCAGGAAGCTCAACAACTCATAAGCCAGGAACAGAGAACGAAACTGTAGTTAGTAGAGACAAATGTGCTCAACTCCAGAATTGCATTGCATGTAGAGAAATTGGTGTGGAAACAAAGCCAAGCAAAATCCAGCAATCAAGTGAGACACAAGAGAAGGATAACAGAACTTGTCAATGTGTTACTAGCAGAAGTGATAGTACATCAACAGTGGCCAAACCTCCATTAGAGCCTAAGATCCTTCTAGTTGAAGATAACAACGTCAACGTTATGGTGGCACGCTCGATGATGAAGCAGTTAGGTCACAGCATAAACGTGGTCAATAATGGAGTGGAAGCTGTTCGTGCAGTTCAGCGCAGGAATTATGACCTCATTCTGATGGATGTGTGCATGCCAGTTATGAATGGTCTTGAAGCAACAAAATTGATTCGCTCTTACGAGGAAACTGGCAATTGGGATGCTGCAACAAAAGCTGGAATTGAACCAAGCAGTTCAACTTCAGATTTGCAGAACTCTGAGCCTTCCACAAAGAGAATGCCCATTATTGCAATGACGGCGAATGCTTTGTCAGAGAGTGCGGAGGAGTGTTACGCAAATGGAATGGACTCATTTGTGTCAAAACCTGTGACTTTCCAGAAATTGAAGGAGTGCCTTGCACAATTCGTACTGTGA 2970 0.4273 MVCEMEHDLMEDMDIEVLPSMWPEDIGTDAGKQFNIEKPGSDQDMLEEVTIVEEPTIVDFKRLMELTNYTDRGSTQLTYFMKYLEYKQANAVRLLREELDNLSKQRQEVELRKLKILEEHRFEDIRYGDDKRPVSILDEVYDIWQDRPRRKNDVVVQNKGIEIDAEYDTVVYWKQRALHLEKLLEASIQREQTLIEKLEESIKNLERQSTPVEELSQILKRADNFLHFILQNAPIVIGHQDKELRYRFIYNHFPRLQEEDIIGRTDVEIFTGSGVRESQDFKREVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKAGETIGINYMGMDVTDQVRKRERMARIREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSTTKLDKEQRQLLEVMLSSGDLVLQLINDILDLSKVESGAMKLEATKFRPREVVKHVLQTAAASLQKILTLEGHVADDVPIEVIGDVLRIRQILTNLVSNAIKFTHEGKVGINLSVVARPNFGQSEDGQQKISGDKSNVSVSGLSEEKYFSASQNGSSDECRSPVKSERSRNGATEEQPHSTETTVCIRCDVYDTGIGIPEKAIPTLFKRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVSSKEHCGSTFTFILPYKVSIACDNSDDPDDKLSDMEKDDAASDDATQGFFQFQPRTLGSLFSSNGSTRASTLRPQKLGLALPHNLNGFSQNSCSLPSNDVTSNGTTSVEDVIRVTTVTDSPEMSESGSSTTHKPGTENETVVSRDKCAQLQNCIACREIGVETKPSKIQQSSETQEKDNRTCQCVTSRSDSTSTVAKPPLEPKILLVEDNNVNVMVARSMMKQLGHSINVVNNGVEAVRAVQRRNYDLILMDVCMPVMNGLEATKLIRSYEETGNWDAATKAGIEPSSSTSDLQNSEPSTKRMPIIAMTANALSESAEECYANGMDSFVSKPVTFQKLKECLAQFVL 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00853 989 FunFam Histidine kinase 5 213 348 - -
Accr3g00853 989 PRINTS Bacterial sensor protein C-terminal signature 644 657 IPR004358 GO:0016310|GO:0016772
Accr3g00853 989 PRINTS Bacterial sensor protein C-terminal signature 620 638 IPR004358 GO:0016310|GO:0016772
Accr3g00853 989 PRINTS Bacterial sensor protein C-terminal signature 585 599 IPR004358 GO:0016310|GO:0016772
Accr3g00853 989 SMART REC_2 844 984 IPR001789 GO:0000160
Accr3g00853 989 Coils Coil 92 119 - -
Accr3g00853 989 SMART HKATPase_4 482 660 IPR003594 -
Accr3g00853 989 FunFam Histidine kinase 5 838 989 - -
Accr3g00853 989 SUPERFAMILY PYP-like sensor domain (PAS domain) 215 333 IPR035965 -
Accr3g00853 989 ProSiteProfiles Histidine kinase domain profile. 378 660 IPR005467 -
Accr3g00853 989 Coils Coil 181 215 - -
Accr3g00853 989 ProSiteProfiles Response regulatory domain profile. 845 988 IPR001789 GO:0000160
Accr3g00853 989 Gene3D - 842 988 - -
Accr3g00853 989 FunFam Putative histidine kinase 5 359 436 - -
Accr3g00853 989 CDD HATPase_EvgS-ArcB-TorS-like 487 657 - -
Accr3g00853 989 Gene3D PAS domain 213 348 - -
Accr3g00853 989 MobiDBLite consensus disorder prediction 924 943 - -
Accr3g00853 989 Gene3D - 437 663 IPR036890 -
Accr3g00853 989 SUPERFAMILY CheY-like 844 987 IPR011006 -
Accr3g00853 989 Gene3D - 359 436 - -
Accr3g00853 989 MobiDBLite consensus disorder prediction 546 577 - -
Accr3g00853 989 CDD REC_hyHK_CKI1_RcsC-like 846 984 - -
Accr3g00853 989 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 425 658 IPR036890 -
Accr3g00853 989 CDD HisKA 370 432 IPR003661 GO:0000155|GO:0007165
Accr3g00853 989 MobiDBLite consensus disorder prediction 923 943 - -
Accr3g00853 989 MobiDBLite consensus disorder prediction 559 573 - -
Accr3g00853 989 Pfam Response regulator receiver domain 846 915 IPR001789 GO:0000160
Accr3g00853 989 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 370 436 IPR036097 GO:0000155|GO:0007165
Accr3g00853 989 SMART HisKA_10 371 436 IPR003661 GO:0000155|GO:0007165
Accr3g00853 989 MobiDBLite consensus disorder prediction 807 838 - -
Accr3g00853 989 MobiDBLite consensus disorder prediction 760 784 - -
Accr3g00853 989 Pfam His Kinase A (phospho-acceptor) domain 373 436 IPR003661 GO:0000155|GO:0007165
Accr3g00853 989 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 12 987 - -
Accr3g00853 989 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 482 658 IPR003594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00853 Accr-Chr3 9439174 9443751 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00853 1 988 Histidine Kinase Gene Family AT5G10720 58.829 0.0 1118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Accr3g00853 HATPase_c 2.1e-27 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00853 - - gmx:100811117 1419.83