Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00851 ATGATGAACAAGTTCTTGTGCCTTCTGCCTTTCTATATCTGGACTCTTACTTGTTTCCTGTGCGTAGCACTAGCTCAGACAAACGCGACTGTGCCGGTGAAAGTCGGAGTCGTACTTGATCTCTCGTCTTCTACGGCAAAGATAGGTTGGAGCTGTATCAACATGTCCCTCCCTGACTTCTATGTCTCTCATTCTCATTTCAAAACCAGGCTCGTCTTCATCCTCAGGGACTCCCAAAGAGACGTCGTTACTGCTGCTGCTCAAGCTATTGACCTCATCAAAACAGAGCAAGTGCAAGCCATAATAGGACCGTCGACATCAATGGAGGCCAACTTTGTGATCAGTCTTGGAGCCGAAGCTCACCTGCCCATCGTAACATTCTCTGCAACGAGTCCTTCCCTCTCTTCTCTTGGGAGCCAATACTTCTTTCAGATTGCACAGAACGATTTGGCTCAAGTGAATGCCATTAGCGCAATCGTGCAAGCTTTTGGGTGGGAGGAGGTTGTGCCCATTTACGTGGAAGACGATTTTGGAAAAGGGGTCACACCCTTCTTAACTAACGCTCTTCAACAAGCCTATGTTCGAATCCCATATATGAGTGCCATTTCACCTTCAGCCACCGATGAAGAAATAAAAACAGAGCTCTCCAATTTGATGACGAATCAAACCAGAGTGTTCGTCGTGCACGTGTCCTCCGATATTGGTATACGTCTCTTCTCCATCGCAAAATTGATTGGTATGATGAACAGAGGCTATGTTTGGATCGTAACCGCTGGTCTGGGTAATATGTTGAATTCCTTCGACTCCCCAGTCATAGAATCAATGCAAGGAGTATTGGGTGTTAAGAGTTATGTTTCTAGAACAAAAAAGCTTGATGATTTTGAAGACAGATGGAAAAGAAAGTTCATACAAGACAATCCAACCCTTTCTGGAATTAATCTGAATGCGTTTGGATTATGGGCTTATGATGCTACCACGGCTTTAGCCATGGCCGTTGAGCAAGTCGGCAATCTCGGCTTCGATATGAGTAACGTTTCAGGTAATTCTTCCGATATTGAAAGCTTGGGAGTTTTAAGAAATGGGGAAAAGCTGGGTGAAGCCATATCCAGAATCAAATTTAGAGGCCTGAGTGGAGAATTCAGTGTTGTTAATGGACAATTGCCGGCATCAGCGTTTGAGATGGTAAATGTGGTTGGTAATGGTCAAAGAACGATAGGATTTTGGACAACACAAAATGGACTAGTTCGAAATCTGAGTTGGACGAACACAAGCACATATTCTACATCAAAGAAGGATCTGCGTGAAGTAACATGGCCAGGGGATACAAATTCCATTCCAAAGGGATGGGAAATCCCTGTAAAAGGAACAAAGCTGAGGGTAGGAGTACCAGTGAAAGCGGGTTACACGGAATTCGTGAAGGCAAAACTTAATCCAGCCACAAATCAACCAGAAATCAAAGGATTCTGCATTGACGTGTTCAAGGCTGTGGTGCAAGCATTGCCTTATGGCCTGCCATATGAATTCATCCCATTTCCTAAGATGGAAGCTGTGATTAGTACAACTCCAATATACGACGACCTTATCAGCCAAGTTTATTTTGGGAACTTCGACGCGGTGGTGGGGGATGTGACGATCATAGCCAACAGGTCCAACCATGTGGATTTCACTTTGCCGTACACTGAATCTGGGGTAACAATGATAGTTCCAGTGAAAGACAAGAGGAAGAAGAATGCGTGGGCCTTCTTAAAGCCACTGACTTGGGATCTTTGGATGACAAGTGCTTGTTCCTTTGTATTTATTGGGTTCGTTGTGTGGGTACTTGAACACCGAGTAAACGAACATTTCAGAGGACCTCCCTCACATCAAATTGGAACCAGCTTATGGTTTTCTTTCTCAATCATGGTTTTTGCCCATCGAGAGAGAGTGGTGAGCAACTTGGGTAGATTTGTGGTAATCATATGGATATTTGTAGTTCTAATTCTGACTCAGAGTTATACTGCAAGTTTGACGTCGCTCATGACAGTTGAACAGCTAAGCCCAACTGTGAAGGACGTGAGTCTACTTATAAAGAACAGATTGAATGTTGGTTATTTGGAAGGTTCTTTTGTACACGGAATTTTGAAGGAGATGGGTTTTCAAGATTACCAACTCAAAATTTATAATTCCACTGAAAGCTGCCATAAATTATTTGAGAAAGGAGTTGAAAATGGTGGAATTGCTGCTGCGTTTGATGAAATTCCATACGTAAAACTCTTTCTTGGGAAGTATTGCTCCAATTACGTTATGGTAGAACCGACTTTCAAAACTGGGGGCTTTGGCTTTGTATTTTCGAAAGGATCTCCTCTTGTAGCTGACATGTCAAGAGCAATCCTGAACGTGACACAAGGGAATAAAATGAAAATAATAGAGAGTGAGTGGTTTAATGGAAGTAACTGCCCAGATTCGAAGGCCTTAGTTCCTTCGAATAGCCTTGGCCTTGATAGCTTCTGGGGCTTGTTTCTGATAGCAGGACTTGCATCTGTATTAGCACTCATAATCTTCACCGTCGCATTCCTATACCAGAACAGAGACATCTGGTCAGGCTATAATCCGGGAGGTACATCAATATGGAGGCGAATAAAGATGTTGGTGAATATTTTTAACCAGAGAGACGAACGCTCTCACACTTTCAAGAAAAAGGAAAAGCGAGATGAGAGTGAAGATGAAAGTAGGAGTAATCATAATGGGTTGGGTGCAGTTGAGGCGTCTCCGGCATCACAGTGTCCACCAAGTCCGTCAAGTGAAGGTGATGAATCAGACTTTTCATTTAATGGAGAGGGTGCTGTGTTTTCTCAAGATCAGTTTGGTGGCGAGGCTAACAATAATCCAAATGCATTTCTGCCTCAAAACGTAGAAATAACCGTCCGCCATTGGGTACAGCATGCCTAA 2928 0.4344 MMNKFLCLLPFYIWTLTCFLCVALAQTNATVPVKVGVVLDLSSSTAKIGWSCINMSLPDFYVSHSHFKTRLVFILRDSQRDVVTAAAQAIDLIKTEQVQAIIGPSTSMEANFVISLGAEAHLPIVTFSATSPSLSSLGSQYFFQIAQNDLAQVNAISAIVQAFGWEEVVPIYVEDDFGKGVTPFLTNALQQAYVRIPYMSAISPSATDEEIKTELSNLMTNQTRVFVVHVSSDIGIRLFSIAKLIGMMNRGYVWIVTAGLGNMLNSFDSPVIESMQGVLGVKSYVSRTKKLDDFEDRWKRKFIQDNPTLSGINLNAFGLWAYDATTALAMAVEQVGNLGFDMSNVSGNSSDIESLGVLRNGEKLGEAISRIKFRGLSGEFSVVNGQLPASAFEMVNVVGNGQRTIGFWTTQNGLVRNLSWTNTSTYSTSKKDLREVTWPGDTNSIPKGWEIPVKGTKLRVGVPVKAGYTEFVKAKLNPATNQPEIKGFCIDVFKAVVQALPYGLPYEFIPFPKMEAVISTTPIYDDLISQVYFGNFDAVVGDVTIIANRSNHVDFTLPYTESGVTMIVPVKDKRKKNAWAFLKPLTWDLWMTSACSFVFIGFVVWVLEHRVNEHFRGPPSHQIGTSLWFSFSIMVFAHRERVVSNLGRFVVIIWIFVVLILTQSYTASLTSLMTVEQLSPTVKDVSLLIKNRLNVGYLEGSFVHGILKEMGFQDYQLKIYNSTESCHKLFEKGVENGGIAAAFDEIPYVKLFLGKYCSNYVMVEPTFKTGGFGFVFSKGSPLVADMSRAILNVTQGNKMKIIESEWFNGSNCPDSKALVPSNSLGLDSFWGLFLIAGLASVLALIIFTVAFLYQNRDIWSGYNPGGTSIWRRIKMLVNIFNQRDERSHTFKKKEKRDESEDESRSNHNGLGAVEASPASQCPPSPSSEGDESDFSFNGEGAVFSQDQFGGEANNNPNAFLPQNVEITVRHWVQHA 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00851 975 SUPERFAMILY Periplasmic binding protein-like II 437 809 - -
Accr3g00851 975 SMART GluR_14 457 809 IPR001320 GO:0015276|GO:0016020
Accr3g00851 975 Gene3D - 458 577 - -
Accr3g00851 975 CDD PBP1_GABAb_receptor_plant 34 418 IPR044440 -
Accr3g00851 975 MobiDBLite consensus disorder prediction 887 958 - -
Accr3g00851 975 FunFam Glutamate receptor 357 456 - -
Accr3g00851 975 Pfam Bacterial extracellular solute-binding proteins, family 3 482 808 IPR001638 -
Accr3g00851 975 MobiDBLite consensus disorder prediction 887 907 - -
Accr3g00851 975 Pfam Receptor family ligand binding region 67 399 IPR001828 -
Accr3g00851 975 MobiDBLite consensus disorder prediction 909 958 - -
Accr3g00851 975 Pfam Ligand-gated ion channel 809 839 IPR001320 GO:0015276|GO:0016020
Accr3g00851 975 SUPERFAMILY Periplasmic binding protein-like I 33 450 IPR028082 -
Accr3g00851 975 FunFam Glutamate receptor 457 578 - -
Accr3g00851 975 CDD GluR_Plant 457 807 - -
Accr3g00851 975 Gene3D - 151 314 - -
Accr3g00851 975 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 33 894 IPR015683 -
Accr3g00851 975 FunFam Glutamate receptor 578 708 - -
Accr3g00851 975 FunFam Glutamate receptor 2.7 715 814 - -
Accr3g00851 975 Gene3D - 363 457 - -
Accr3g00851 975 FunFam Glutamate receptor 148 303 - -
Accr3g00851 975 Gene3D - 578 709 - -
Accr3g00851 975 Gene3D - 753 814 - -
Accr3g00851 975 PIRSF IGluLR_plant 2 939 IPR017103 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00851 Accr-Chr3 9420519 9423910 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00851 28 922 Ion Channels AT2G29120 49.778 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00851 K05387 - qsa:O6P43_019170 1149.81