Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Accr3g00850 | ATGTCCCATGAAATAAGATCTCCACTTTCTGGGGTTGTTAGCATGGCTGAGATTCTTTCTACTACAAAACTTGACAAGGAGCAAAGACAGCTCTTGGAAGTCATGCTTTCCTCAGGAGATTTGGTTCTTCAACTTATAAATGACATATTAGATCTTTCCAAGGTCGAGTTAGGAGCCATGAAGTTGTAA | 189 | 0.3968 | MSHEIRSPLSGVVSMAEILSTTKLDKEQRQLLEVMLSSGDLVLQLINDILDLSKVELGAMKL | 62 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Accr3g00850 | 62 | SMART | HisKA_10 | 1 | 58 | IPR003661 | GO:0000155|GO:0007165 | |
| Accr3g00850 | 62 | Gene3D | - | 1 | 56 | - | - | |
| Accr3g00850 | 62 | SUPERFAMILY | Homodimeric domain of signal transducing histidine kinase | 1 | 58 | IPR036097 | GO:0000155|GO:0007165 | |
| Accr3g00850 | 62 | FunFam | Putative histidine kinase 5 | 1 | 58 | - | - | |
| Accr3g00850 | 62 | CDD | HisKA | 1 | 54 | IPR003661 | GO:0000155|GO:0007165 | |
| Accr3g00850 | 62 | ProSiteProfiles | Histidine kinase domain profile. | 1 | 62 | IPR005467 | - | |
| Accr3g00850 | 62 | PANTHER | TWO-COMPONENT HISTIDINE PROTEIN KINASE | 1 | 62 | - | - | |
| Accr3g00850 | 62 | Pfam | His Kinase A (phospho-acceptor) domain | 1 | 56 | IPR003661 | GO:0000155|GO:0007165 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Accr3g00850 | Accr-Chr3 | 9412491 | 9412779 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Accr3g00850 | 1 | 62 | Histidine Kinase Gene Family | AT5G10720 | 90.323 | 5.61e-31 | 110 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Accr3g00850 | - | - | zju:107420093 | 112.849 |