Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00849 ATGAAGAAGAGGAGGGGCGCCAAAGTTGCAGACGCCCTGGTCTTCTATTGTGCTGTGATGACTCTCTGTCTGAGGCTGAGCGTCTCACAAAGCAACACAACTACTACGGTGCCGGTGAAGGTGGGAGTTGTACTTGATCTTTCCCACACAACTGCTAAAATCGGACTCAGCTGCATCAACATGTCCCTCTCCGACTTTTATGCCTCTCATTCTCATTACAACACCAGGCTCCTCCTCCACGTCACTGACTCCCACTCACACGTCATCACTGCTGCCTCTCAAGCTATAGATCTCATAAAAGTAGAACAAGTGCAAGCCATAATCGGACCCTTTACGACAATGGAAGCTAACTTCGTCATCAGTCTTGGAGACAGAGCTCATGTGCCCATCGTGACATTTTCGGCAACAAGTCCTTCTCTTGCTTCCCTTCGGAGTCCATATTTCTTTCGAGCTGCACAAAACGATTCAGCTCAAGTGAACGCCATTGGAGCAATCGTTCAAGCTTTCGGGTGGAAAAACGTGGTGCCCATTTACACAGGCAACGATTACGGGAAAGGGATCATACCCTTTTTGACTAATCCTCTTCAACAAGTGTACGTTCAAATCCCATATCAGAGTTCTATTTCAGCTTCAGCCACCGATGAGGATATCAAAGCAGAGCTCTACAAGTTAATGACCATGCAAACCAGAGTGTTTGTTGTGCACATGACACCTAACCCAGGCGAGCGACTCTTTAGAATAGCATACGAGATTGGTATGATGAACTTCGGCTATGTTTGGATCGTCACCGATGGTTTGGGCAATGAGGTGAATTCATTAGGATCCTCAGTGATAGATTCGATGCAAGGAGTACTGGGTGTGAGGACCTATGTTCCAAAAACAGAACGGCATGACGATTTTAAAGTTCGATGGAGAAGAAAATTCGTAAAAGACAATCCTACCCTTGTTCATACAGATTTGAATGTTTTTGGAAATTGGGCTTATGATGCTGCCACAGCATTAGCTATGGCTGTTGAGAAGGCCGGCGCCAAGAATCTCGGATTCGATATGAGAAATAATGCTTCTGGTAATTTTTCTGATCTTTTAAAGTTGGGAGTTTCAGAGAATGGGGAAAATCTGAGTAAGGCATTATCAGAGACCAGATTTAGTGGCATGAGTGGAGAGTTCAGTGTTATTGAGGGGCAATTGCAAGCATCCACATTTGAGATAATCAACGTTAATGGTAAAGGAGAGAGACAGGTCGGATTTTGGACACCAGGAAAAGGAATAACAAGGGATCTGAATTTCACGAGCACAAGCACTGCATATTCTAGTTCTAGGAATAATTTGAAGCCTATCATATGGCCAGGGGATACATCCTCTGTTCCAAAGGGTTGGGATAATCCTACAAATAAGAAAAAGACCATGAGGATAGGAGTTCCTGTGAAAAAGGGTTTTACTGAATTTGTGAAGGTAACACATGATCGGAGCACCAATACAACAGATGTCACTGGATTCTGCATTGATGTCTTTAAGGCAGTGCTGGCAGTTTTGCCTTACGCTGTCCCTTACGAATTTATCCCATTTGAGAAACCCGATGGAGAACCAGCAGGAACATACGATGAGCTGGTCAACCAAGTTTCTTATGGGAATCTGGATGCTGTTGTTGGAGATACGACGATTACAGCAGCGAGGTCGAATGAGGTGGACTTCATTATGCCATACACAGAATCTGGTGGGACTATGATTGTTCTGTTAGTAAAAAATAAGCACAAGAGTCCATGGAATTTCTTGAAGCCGTTGACGTGGGATCTGTGGGTGACTACAGCTTTTTCGTTCATATATGTTGCCTTCGTCGTATGGGTGCTTGAGCATCGAATAAACGATGCGTTCCGAGGACCTCCTTCACATCAGATTGGTACCAGCTTATGGTTTTCATTCTCAATCTTGGTGTTCGCCCATCGGGAGAAAATAGTAAGCAACTATGCTAGATTTGTGGTAATAATGTGGGTCTTCGTGGTACTAATTCTGACCCAAAGCTACACGGCAAGCTTGGCTTCACTCTTGACCGTTCATCAGCTGCGTCCAAGTGTTACAGATGTGAATCAATTGATAAAAAATAAGCTGAATGTTGGGTACCACAGTGGTTCTTTTGTGTATGGGATGTTAAAGAAAATGGGATTTCAAGATTCCCAACTCATTCCTTTTGGTTCCCCAGAACAGTGTGACGAACTGTTTACACAAGGAAGTGCCAAGGGTGGCATTGACGCAGCTTTTGATGAAATGCCCAATGTGAAGCTCTTTCTTGCAACTTACTGCTCCAAATATGCTTCCATGGCTCCACCTACCTTTAGAACTGATGGCTATGGCTATGTGTTCCCTAAAGGGTCTCCTCTAGTGGCAGACGTCTCAAGGGGAATCCTTAATGTGACTCAGTGA 2418 0.4438 MKKRRGAKVADALVFYCAVMTLCLRLSVSQSNTTTTVPVKVGVVLDLSHTTAKIGLSCINMSLSDFYASHSHYNTRLLLHVTDSHSHVITAASQAIDLIKVEQVQAIIGPFTTMEANFVISLGDRAHVPIVTFSATSPSLASLRSPYFFRAAQNDSAQVNAIGAIVQAFGWKNVVPIYTGNDYGKGIIPFLTNPLQQVYVQIPYQSSISASATDEDIKAELYKLMTMQTRVFVVHMTPNPGERLFRIAYEIGMMNFGYVWIVTDGLGNEVNSLGSSVIDSMQGVLGVRTYVPKTERHDDFKVRWRRKFVKDNPTLVHTDLNVFGNWAYDAATALAMAVEKAGAKNLGFDMRNNASGNFSDLLKLGVSENGENLSKALSETRFSGMSGEFSVIEGQLQASTFEIINVNGKGERQVGFWTPGKGITRDLNFTSTSTAYSSSRNNLKPIIWPGDTSSVPKGWDNPTNKKKTMRIGVPVKKGFTEFVKVTHDRSTNTTDVTGFCIDVFKAVLAVLPYAVPYEFIPFEKPDGEPAGTYDELVNQVSYGNLDAVVGDTTITAARSNEVDFIMPYTESGGTMIVLLVKNKHKSPWNFLKPLTWDLWVTTAFSFIYVAFVVWVLEHRINDAFRGPPSHQIGTSLWFSFSILVFAHREKIVSNYARFVVIMWVFVVLILTQSYTASLASLLTVHQLRPSVTDVNQLIKNKLNVGYHSGSFVYGMLKKMGFQDSQLIPFGSPEQCDELFTQGSAKGGIDAAFDEMPNVKLFLATYCSKYASMAPPTFRTDGYGYVFPKGSPLVADVSRGILNVTQ 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00849 805 Pfam Bacterial extracellular solute-binding proteins, family 3 493 803 IPR001638 -
Accr3g00849 805 Gene3D - 586 719 - -
Accr3g00849 805 FunFam Glutamate receptor 587 717 - -
Accr3g00849 805 Gene3D - 67 160 - -
Accr3g00849 805 Gene3D - 365 467 - -
Accr3g00849 805 SUPERFAMILY Periplasmic binding protein-like I 38 450 IPR028082 -
Accr3g00849 805 FunFam Glutamate receptor 158 318 - -
Accr3g00849 805 Gene3D - 161 326 - -
Accr3g00849 805 FunFam Glutamate receptor 366 466 - -
Accr3g00849 805 SMART GluR_14 470 805 IPR001320 GO:0015276|GO:0016020
Accr3g00849 805 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 39 804 IPR015683 -
Accr3g00849 805 Pfam Ligand-gated ion channel 596 732 IPR001320 GO:0015276|GO:0016020
Accr3g00849 805 Pfam Receptor family ligand binding region 58 408 IPR001828 -
Accr3g00849 805 PIRSF IGluLR_plant 8 805 IPR017103 -
Accr3g00849 805 FunFam Glutamate receptor 468 587 - -
Accr3g00849 805 CDD GluR_Plant 467 805 - -
Accr3g00849 805 Gene3D - 468 585 - -
Accr3g00849 805 CDD PBP1_GABAb_receptor_plant 40 427 IPR044440 -
Accr3g00849 805 SUPERFAMILY Periplasmic binding protein-like II 446 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00849 Accr-Chr3 9395810 9399126 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00849 1 805 Ion Channels AT2G29120 51.177 0.0 797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00849 K05387 - qsa:O6P43_019170 1030.01