Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00847 ATGATGAACAAGTTCATGTGCCTTCTGCTCTTCTTTATCTGGACTCTTACTTGTTTCATGCGCGTAGCACTAGCTCAGACAAACGCCACTGTGCCGGTGAAAGTAGGAATCGTACTTGATCTCTCGTCTCCTACGGCAAAGATAGGTTGGAACTGTATCAACATGTCCCTCTCTGACTTCTATGTCTCTCATCCTCATTACAAAACCAGGCTCGTCTTCATCCTCAGGGACTCCCAAAGAGACATCGTTGCTGCTGCTGCTCAAGCTATTGACCTCATCAGAACAGAGCAAGTGCAAGCCATAATAGGACCATCGACATCAATGGAGGCCAACTTTGTGATCAGTCTTGGAGCCGAAGCTCACGTGCCCATCGTAACCTTCTCTGCAACGAGTCCTTCCCTCTCTTCTCTTGGGAGCCAATACTTCTTTCAGATTTCACAAAATGATTTGGCTCAAGTGAATGCCATTAGCGCAATCGTGCAAGCTTTTGGGTGGGAGGAGGCTGTGCCCATTTACTTAGAAGACGATTTTGGAAAAGGGATCACACCATTCTTAACTAACGCTCTTCAACAAGCCTATGTTCGAATCCCATATATGAGTGCCATTTCACCTTCAGCCACCGATGAAGAAATAAAAACAGAGCTCTCCAATTTGAAGAGGAATCAAACCAGACTGTTCGTTGTGCACGTGCCCTCCGATATTGGTATACGCCTCTTCTCCATCGCAAAACTGATTGGTATGATGAACAGAGGCTATGTTTGGATCGTAACCACTGGTTTGGGTAATATGTTGAATTCCTTCGAATCCCCAGTCATAGAGTCAATGCAAGGAGTATTGGCTGTTAAGAGTTATGTTTCTAGAACAAAAAAGCTTGATGATTTTGAAGACAGATGGAAAAGAAAGTTCATACAAGACAATCCAACCCTTGCTGGAATTAATCTGAATGCGCTTGGATTATGGGCTTATGATGCTACCACGGCTTTAGCCATGGCAGTTGAGCAAGTCGGCAATCTCGGCTTCGATGTGAGTAACGTTTCAGGTAATTCTTCCGATATTGAAAGCTTGGGAGTTTCAAGAAATGGGGAAAAGCTGGGTGAAGCCATATCCAGAATGAAATTCAGAGGCCTGAGTGGAGAATTCAGTGTTGTTAATGGACAATTGCTGGCATCAGCGTTTGAGATGGTAAATGTGGTTGGTAAAGGTCAAAGAACGATAGGATTTTGGACCGCACAAAATGGATTTGTTCGGAATCTGAGTTGGACGAACACAAGCACATATTCTAAATCAAAGAAGGATCTGCGTGAAGTATCATGGCCAGGGGATACAAATTCCATCCCAAAGGGATGGGAAATCCCTGTAAAAGGAACAAAGCTGAGGGTAGGAGTACCAGTGAAAACGGGTTACACGGAATTCGTGAAGGCAATACTTAATCCAGCCACAAATCAAACAGAAATCACAGGATTCTGCATTGACGTGTTCAACTCTGTGGTGCAATTATTGCCTTATGGCCTGCCATATGAATTCATCCCATTTCCTAAGATGGAAGCTGTGATTAGTACAACAATATACGACGACCTTATCAACCAAGTATATTTTGGGAACTTCGACGCGGTGGTGGGGGATGTGACGATCATAGCCAACAGGTCCAACCATGTGGATTTCACTTTGCCGTACACTGAATCTGGGGTAACAATGATAGTTCCAGTGAAAGACAAGAGGAAGAAGAATGCGTGGGCCTTCTTAAAGCCACTGACTTGGGATCTTTGGGTCGCAAGTGCTTGTTCCTTTGTATTTATTGGGTTCGTTGTGTGGGTGCTTGAACACCGAGTAAACGAACATTTCAGAGGACCTCCCTCACATCAAATTGGAACCAGCTTATCGTTTTCTTTCTCAATCATGGTTTTTGCCCATCGAGAGAGAGTGGTGAGCAACTTGGGTAGATTTGTGGTAATCATATGGATATTTGTAGTTCTAATTCTGACTCAGAGTTATACTGCAAGTTTGACGTCGCTCATGACAGTTGAACAGCTTAGCCCAACTGTGACGGACGTGAGTCTACTTATAAAGAACAGATTGAATGTTGGTTATTTGGAAGGTTCTTTTGTACATGGAATTTTGAAGGAGATGGGTTTTCAAGATTACCAACTCAAAATTTATAATTCCACTGAAAGCTGCCATAAATTATTTGAGAAAGGAGTTGAAAATGGTGGAATTGCTGCAGCGTTTGATGAAATTCCATACGTAAAACTCTTTCTTGGGAATTATTGCTCCAGTTATATCATGGTTGAACCGACTTTCAAAACTGGGGGCTTTGGCTTTGTATTTTCAAAAGGATCTCCTATTGTAGCTGACATGTCAAGAGCAATCCTGAACGTGACACAAGGGAATGAAATGAAAAGAATAGAGAGTGAATGGTTCAAAGGAAGTAATTGCCCAGATTCGAAGGCCTTAGTTTCTTCAAATAGCCTTGGCCTCGAGAGCTTCTGGGGCTTGTTCCTCATAGCAGGACTGGCATCTGTATTAGCACTCATAATCTCCACCGTCACATTCCTATACCAGAACCGAGACATCTGGTCAGGCTATAATCCGGAAGGTACATCAATATGGAGGCGAATAAAGATGTTGGTGAATATTTTTAACCAGAGAGACGAAAGCTCTCACACTTTCAAGAAAAAGGAAAAGCGAGATGAAAGTGGGAGTAATCATAATGGGTTGGGTGCAGTTGAGGCGTCTCCCGCATCACAGTGTCCACCAAGTCCGTCAAGTGAAGGTGATGAATCTGAGTTTTCATTTAATGGAGAGGGTGCTGTGTCTTCTCAAGATCAGTTTGGTGGTGAGGCTAACAATAATCCAGATGCATATCTGCCTCAAAACGTAGAAATAACCGTCCGCCACTGGGTACAGCATGCTTAA 2913 0.4332 MMNKFMCLLLFFIWTLTCFMRVALAQTNATVPVKVGIVLDLSSPTAKIGWNCINMSLSDFYVSHPHYKTRLVFILRDSQRDIVAAAAQAIDLIRTEQVQAIIGPSTSMEANFVISLGAEAHVPIVTFSATSPSLSSLGSQYFFQISQNDLAQVNAISAIVQAFGWEEAVPIYLEDDFGKGITPFLTNALQQAYVRIPYMSAISPSATDEEIKTELSNLKRNQTRLFVVHVPSDIGIRLFSIAKLIGMMNRGYVWIVTTGLGNMLNSFESPVIESMQGVLAVKSYVSRTKKLDDFEDRWKRKFIQDNPTLAGINLNALGLWAYDATTALAMAVEQVGNLGFDVSNVSGNSSDIESLGVSRNGEKLGEAISRMKFRGLSGEFSVVNGQLLASAFEMVNVVGKGQRTIGFWTAQNGFVRNLSWTNTSTYSKSKKDLREVSWPGDTNSIPKGWEIPVKGTKLRVGVPVKTGYTEFVKAILNPATNQTEITGFCIDVFNSVVQLLPYGLPYEFIPFPKMEAVISTTIYDDLINQVYFGNFDAVVGDVTIIANRSNHVDFTLPYTESGVTMIVPVKDKRKKNAWAFLKPLTWDLWVASACSFVFIGFVVWVLEHRVNEHFRGPPSHQIGTSLSFSFSIMVFAHRERVVSNLGRFVVIIWIFVVLILTQSYTASLTSLMTVEQLSPTVTDVSLLIKNRLNVGYLEGSFVHGILKEMGFQDYQLKIYNSTESCHKLFEKGVENGGIAAAFDEIPYVKLFLGNYCSSYIMVEPTFKTGGFGFVFSKGSPIVADMSRAILNVTQGNEMKRIESEWFKGSNCPDSKALVSSNSLGLESFWGLFLIAGLASVLALIISTVTFLYQNRDIWSGYNPEGTSIWRRIKMLVNIFNQRDESSHTFKKKEKRDESGSNHNGLGAVEASPASQCPPSPSSEGDESEFSFNGEGAVSSQDQFGGEANNNPDAYLPQNVEITVRHWVQHA 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00847 970 MobiDBLite consensus disorder prediction 886 900 - -
Accr3g00847 970 MobiDBLite consensus disorder prediction 904 956 - -
Accr3g00847 970 FunFam Glutamate receptor 152 311 - -
Accr3g00847 970 Gene3D - 756 813 - -
Accr3g00847 970 CDD PBP1_GABAb_receptor_plant 34 418 IPR044440 -
Accr3g00847 970 FunFam Glutamate receptor 357 456 - -
Accr3g00847 970 Pfam Receptor family ligand binding region 54 398 IPR001828 -
Accr3g00847 970 SMART GluR_14 457 808 IPR001320 GO:0015276|GO:0016020
Accr3g00847 970 SUPERFAMILY Periplasmic binding protein-like I 33 450 IPR028082 -
Accr3g00847 970 Pfam Bacterial extracellular solute-binding proteins, family 3 482 807 IPR001638 -
Accr3g00847 970 FunFam Glutamate receptor 577 707 - -
Accr3g00847 970 PIRSF IGluLR_plant 1 943 IPR017103 -
Accr3g00847 970 Gene3D - 360 457 - -
Accr3g00847 970 Pfam Ligand-gated ion channel 808 838 IPR001320 GO:0015276|GO:0016020
Accr3g00847 970 Gene3D - 151 313 - -
Accr3g00847 970 Gene3D - 458 576 - -
Accr3g00847 970 Gene3D - 577 708 - -
Accr3g00847 970 MobiDBLite consensus disorder prediction 886 956 - -
Accr3g00847 970 FunFam Glutamate receptor 2.7 714 813 - -
Accr3g00847 970 FunFam Glutamate receptor 457 577 - -
Accr3g00847 970 SUPERFAMILY Periplasmic binding protein-like II 437 809 - -
Accr3g00847 970 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 33 888 IPR015683 -
Accr3g00847 970 CDD GluR_Plant 457 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00847 Accr-Chr3 9381256 9384617 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00847 3 952 Ion Channels AT2G29120 47.803 0.0 851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00847 K05387 - qsa:O6P43_019170 1132.86