Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00846 ATGAGGAAGCTGATCGTCTTGTTCATGTGGGCTTTATGTTGCTCCCTCAGCAGCATGGCACAGACAAACAAAAGCGTGCCAGTAAAAGCAGGAATCGTACTTGATCTTTCTTCTCCGGCCGCAAGGATGGGCTTGAGCTGTATCAACATGTCCCTCTCTGACTTTTATGCCTCTCATTTTCATTACAACACCAGGCTCGTCTTCATCGTCAGGGACTCTCACTCAGATGTTGTTTCTGCAGCTTCTCAAGCTCTAGATCTCATGAAGACAGAGAAAGTGCAAGCCATAATAGGTCCATTCACGTCAATGGAGGCCATCTTTTTGATCAGTCTGGGAGGCAAAGCTCATGTTCCCATCATAACCTTTTCAGCAACAAGTCCTTCTCTGGCTTCCCTTCCAAGTTCATATTTTTTCCGAATTGCACAGACTGATTCAGCCCAAGTTAACGCCATTGGAGCAATCGTACAAGCTTTTGGGTGGAAAGAGGCAGTGCCCATTTACACAGACAACGAGTATGGGAAAGGGGTCATACCATTTTTGACCAATTCTCTTCAACAAGTGTACGTTCGAATCCCATATCAGAGTTCTATTTCAGCTTCAGCCACTGATGAAGATATCAGAGCAGAGCTCTACAAGTTAATGACCATGCAAACCAGAGTGTTTGTTGTGCACATGACCCCAAATCCAGGCGTGCGACTCTTCACCATTGCAAAACAGATTGGAATGATGAGCAAGGGTTATGTTTGGATCGTAACAGATGGTTTGGCTAATGGATTAAGCTCTTTGAATTCCTCAGTCATAGAATCAATGGAAGGAGTGTTGGGTGTTAGGACCTATATTCCCAAAACAAAGCAGTTAGATGAGTTTAATGTTCGATGGAAAAGAAGATTCCTACAAGACAATCCTACCCTTGTTCATACAGATTTGAACGTTTTCGGGGTATGGGCTTATGATGCTGTCACAGCATTAGCTATGGCTATTGAGAAAGTTGATACCAACAATCTTGGTTTTGCTATGACCAATGCTACTTCGTCCAACTCAACTGATTTGGAAAGGATCGGAGTTTCAAAAAGTGGTCAAAAGCTTCGCGAAGCCTTGTCAAACACTACATTTACAGGCCTAAGTGGAGAATTCAGCATTGTTAACAGGCAATTGCAAGCTTCAACCTTTGAGATATTGAATGTGATTGGGAATGGAGGAAGAACAATAGGGTTTTGGACACCACAAAATGGAATAGTCAGAAATCTAAACTCAACTAAGACCAAGATGTATTCTACATCAAGTAAGGATCTTGGTACAATTATATGGCCAGGGGACACGAACTCTGTTCCAAAGGGATGGGAAATCCCCACAAATGCGAGGAAGTTAAGGATAGGGGTGCCAGAGAAAAATGGTTATCCTCAATTCGTGAAAGTATCTTATGATCCCATCACTAATACAACAGATGTCACTGGATTTTGCATTGATGTATTCAAAGCAGTTTTGGAAGTTCTCCCTTATGCCTTACCCTATGAATTTATCCCTTTTACTAAACCAAATGGCGATAGTGCAGGATCATACAATGAACTGATTAGCCAAGTTTATTTTGGGAACTTTGATGCCGTGGTGGGGGATGTAACAATTATAGCAAACAGGTCCAACTATGTGGATTTCACTTTGCCGTACACTGAATCTGGTGTAACAATGGTAGTTCCAGTGAAAGACGAAAGGGAGAAGAATGCTTGGGCCTTCTTAAAGCCATTGACTTGGGATCTTTGGGTAACAATAGCTTGTTCCTTTCTATTCATTGGGTTTGTTGTGTGGGCGCTTGAACACAGAATAAACGAACATTTTAGAGGACCCCTATCTCACCAGATTGGAACAAGCTTATGGTTTTCATTCTCGACCATGGTTTTTGCACATAGAGAAAAAGTGGTGAGCAACCTGGGTAGATTTGTGGTGATTATATGGGTTTTTGTGGTTCTAATTCTGGTTCAAAGCTACACTGCTAGTTTAACCGCACTTTTGACAGTTGATCAGCTCAACCCAACTGTAACTGACGTTAATTTACTGATAAAGAACGGAATGAATGTTGGTTACAAGCAAGGTTCGTTTGTGCTTGAAATCTTGAAGGAAATGGGTTTCCTTGATTACCAACTTAAAACGTATAAATCCCCCGAGGAATGCAACGAACTATTTGAAAGAGGAAATGCAAATGGTGGCATTGCAGCTGCTTTTGATGAATTGCCTTACGTTGTCAAAGTCTTCCTTCAAAGTTATTGCTCTAAGTATGCCATGCTTGAGCCAACTTTTAAAACTGGCGGCTTTGGATTTGTGTTCCCTAAAGGTTCTCCTCTTGTGGCTGACATTTCAAGGGCAATCCTGAATGTTACACAAGGAGATAAAATGAAGGTGATAGAGAATGCTTGGTTCAGAAAAAACAACTGCCCAGGTTCTAATACCTCAATTTCATCAAACATTCTTGGACTTGAAAGCTTCTGGGGACTATTTCTCATTGTAGGGATTACTTCTGCTCTGGCTCTAACTGTCTACGCCGTTAACTTCCTATACCAGCACAAGCAAATCTGGTTACATAATGATCCCAATACCTCACAGTGGAAACGAATTAGGAAGTTGATAGATAAGTTTGACCAGAGGGACATGAATTCTCACACCTTCAGAAAAAGGGAAATGCAGAATAACAGTGAAGATTATAGCAGACATGATATATGTGAATTTGAGGCATCTCCACGTACAAATTGCTCTCCAAATTCATCAGAATCAGAATCAAGTTTCTCGTTTTGTAGCGAGGCTAGCCCTAATAGGCCAGCACCACAGGACAAATAA 2826 0.4154 MRKLIVLFMWALCCSLSSMAQTNKSVPVKAGIVLDLSSPAARMGLSCINMSLSDFYASHFHYNTRLVFIVRDSHSDVVSAASQALDLMKTEKVQAIIGPFTSMEAIFLISLGGKAHVPIITFSATSPSLASLPSSYFFRIAQTDSAQVNAIGAIVQAFGWKEAVPIYTDNEYGKGVIPFLTNSLQQVYVRIPYQSSISASATDEDIRAELYKLMTMQTRVFVVHMTPNPGVRLFTIAKQIGMMSKGYVWIVTDGLANGLSSLNSSVIESMEGVLGVRTYIPKTKQLDEFNVRWKRRFLQDNPTLVHTDLNVFGVWAYDAVTALAMAIEKVDTNNLGFAMTNATSSNSTDLERIGVSKSGQKLREALSNTTFTGLSGEFSIVNRQLQASTFEILNVIGNGGRTIGFWTPQNGIVRNLNSTKTKMYSTSSKDLGTIIWPGDTNSVPKGWEIPTNARKLRIGVPEKNGYPQFVKVSYDPITNTTDVTGFCIDVFKAVLEVLPYALPYEFIPFTKPNGDSAGSYNELISQVYFGNFDAVVGDVTIIANRSNYVDFTLPYTESGVTMVVPVKDEREKNAWAFLKPLTWDLWVTIACSFLFIGFVVWALEHRINEHFRGPLSHQIGTSLWFSFSTMVFAHREKVVSNLGRFVVIIWVFVVLILVQSYTASLTALLTVDQLNPTVTDVNLLIKNGMNVGYKQGSFVLEILKEMGFLDYQLKTYKSPEECNELFERGNANGGIAAAFDELPYVVKVFLQSYCSKYAMLEPTFKTGGFGFVFPKGSPLVADISRAILNVTQGDKMKVIENAWFRKNNCPGSNTSISSNILGLESFWGLFLIVGITSALALTVYAVNFLYQHKQIWLHNDPNTSQWKRIRKLIDKFDQRDMNSHTFRKREMQNNSEDYSRHDICEFEASPRTNCSPNSSESESSFSFCSEASPNRPAPQDK 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00846 941 Gene3D - 42 149 - -
Accr3g00846 941 Gene3D - 150 312 - -
Accr3g00846 941 SMART GluR_14 455 806 IPR001320 GO:0015276|GO:0016020
Accr3g00846 941 FunFam Glutamate receptor 455 574 - -
Accr3g00846 941 SUPERFAMILY Voltage-gated potassium channels 585 873 - -
Accr3g00846 941 FunFam Glutamate receptor 2.7 711 811 - -
Accr3g00846 941 MobiDBLite consensus disorder prediction 908 941 - -
Accr3g00846 941 SUPERFAMILY Periplasmic binding protein-like II 433 807 - -
Accr3g00846 941 Pfam Ligand-gated ion channel 806 835 IPR001320 GO:0015276|GO:0016020
Accr3g00846 941 CDD PBP1_GABAb_receptor_plant 31 416 IPR044440 -
Accr3g00846 941 PIRSF IGluLR_plant 1 938 IPR017103 -
Accr3g00846 941 Gene3D - 339 454 - -
Accr3g00846 941 Pfam Bacterial extracellular solute-binding proteins, family 3 480 805 IPR001638 -
Accr3g00846 941 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 28 883 IPR015683 -
Accr3g00846 941 Gene3D - 575 704 - -
Accr3g00846 941 FunFam Glutamate receptor 574 704 - -
Accr3g00846 941 FunFam Glutamate receptor 318 454 - -
Accr3g00846 941 SUPERFAMILY Periplasmic binding protein-like I 28 448 IPR028082 -
Accr3g00846 941 CDD GluR_Plant 454 804 - -
Accr3g00846 941 Gene3D - 455 574 - -
Accr3g00846 941 Pfam Receptor family ligand binding region 47 397 IPR001828 -
Accr3g00846 941 Gene3D - 751 811 - -
Accr3g00846 941 MobiDBLite consensus disorder prediction 910 933 - -
Accr3g00846 941 FunFam Glutamate receptor 149 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00846 Accr-Chr3 9349692 9353228 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00846 6 920 Ion Channels AT2G29120 52.391 0.0 938