Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00816 ATGGGCGTAAAGGAAGAAACGCTTCAATCGGAGTTGAAACGTGTGAGAGATGAGAATGACGCTTTGAAAGTGATGCTTCAAGTTCTGAACAGCAAATACGAAAAGGTTCAGTCTCAGCTTGAAGAAATAAGAGGATGGGATTCCAATATTCAAATTGCATCATCAGTTTCTGATTACGATATTCCGAACAATAAGAGACCAAGAATTGAGTTGCCCATATCTCATAAACCACTACAGATCTTCGCCAGAACCCATCCCAAGGATAACAGTATGATAGTAAGAGATGGATACCAGTGGAGAAAGTATGGCCAGAAGGTTACAAAAGATAATCCATCGCCTCGAGCTTACTTCAGATGTTCCATGTCTCCAAACTGCCCAGTCAAAAAGAAGGTACAAAGATGCTTGCAAGACAGGTCAATCCTAGTGGCAACTTATGAAGGAGAACACAACCATGGGGTTGTTGATCCTAAAACTCCCAGAGGCTCAATTGTTGACGACAGAGAAGTGACCAAATTTAATGATGTTGAGTTTCCTACTTGGATTCTGACAGATAGAAGACACAGTACTGAGGATCTGAGCAACTTCAGAATTGAACAATTTGTAGGTTCTCTCATCAAAGATCCCAACTTTACCGTATGCTTAGCCGAAGCGGTTGCACGCTCCATCAGTACCCAACAACAACAACGTAAGCAACAACAAGACCTTGACCTTAATTTGAGTCTTGCTGAAGTGTAA 735 0.4163 MGVKEETLQSELKRVRDENDALKVMLQVLNSKYEKVQSQLEEIRGWDSNIQIASSVSDYDIPNNKRPRIELPISHKPLQIFARTHPKDNSMIVRDGYQWRKYGQKVTKDNPSPRAYFRCSMSPNCPVKKKVQRCLQDRSILVATYEGEHNHGVVDPKTPRGSIVDDREVTKFNDVEFPTWILTDRRHSTEDLSNFRIEQFVGSLIKDPNFTVCLAEAVARSISTQQQQRKQQQDLDLNLSLAEV 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00816 244 Gene3D WRKY domain 81 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr3g00816 244 ProSiteProfiles WRKY domain profile. 88 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g00816 244 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 6 43 IPR044810 GO:0003700
Accr3g00816 244 SMART WRKY_cls 93 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g00816 244 Pfam WRKY DNA -binding domain 95 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g00816 244 SUPERFAMILY WRKY DNA-binding domain 89 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr3g00816 244 Coils Coil 5 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00816 Accr-Chr3 9128735 9130102 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00816 8 230 WRKY Transcription Factor Family AT1G80840 36.071 1.39e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr3g00816 WRKY 7.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00816 - - gmx:100170679 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00816 3 9128735 9130102 Accr4g00847 4 8005724 8007052 CCT