Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00803 ATGACTGTAGAAACCAGAGCTGATGAACCCAGAGGACAATTTCCTGTTGGAATGCGTGTTCTTGCTGTTGACGATGACCCAACTTGTCTCTTGGTGTTGGAAACTCTCCTTCGGAGATGCCAATATCACGTAACGACGACCAATCAGGCAATAACAGCTTTGAAGATGCTAAGAGAAAACAAAAACAAGTTCGACCTGGTTATTAGTGATGTTCATATGCCTGACATGGACGGATTTAAGCTTCTTGAGCTTGTTGGTCTTGAGATGGACCTACCTGTCATAATGTTGTCTGCAAATGGCGACACCAAGCTGGTGATGAAGGGGATTTCTCATGGGGCTTGTGACTATCTTCTGAAACCTGTTCGAATCGAGGAGCTCAAGAACATTTGGCAGCATGTGATAAGGAGGAAGAAATTTGACCCAAAGGAGAAAAACAGTACTTGCAATCAAGACAAGCCTCAATCTGGTACTACCAACAATGGATTAAGTTCAGCAGGAGCTGGGAGTACTGATCTAAATGCAAAGCTCAACAAGAAAAGGAAGGATCAGGATGATGAAGATGATGATGAGCAAGAGCATGGTCATGACAACGATGATCCTTCAACACAGAAGAAGCCTCGTGTTGTTTGGTCTGTTGAGCTCCACAGAAAGTTTGTTGCTGCTGTTAACCAATTAGGCATTGACAAGGCTGTGCCTAAAAAGATTCTGGATTTGATGAATGTTGAGAAGCTCTCAAGGGAGAACGTGGCAAGCCATCTCCAGAAATATAGGCTGTATCTGAAGAGAATCAGCTGTGTAGCAAACCAGCAGGCTAATATGGTGGCAGCCTTAGGTAGCGCAGATGCATCCTATTTGAGAGTGGGATCTCTGGGTGGGATGAAACATCTTCAGCCATTGGGTGCTTCTGGACAGTTCCAGAACAATGTTTATCGATCCCTCCCATATAGTGGGATGATTGGAAGGCTTAACACCCCTGCTGGTCTCGGTGTTCATGGGTTGCCTTCTTCAGGAATTCTTCAGTTGGGTCATGCACAGAATTTAAACAACAGCAGTGGCAACTCCATGAATGATCCTCTCAAGTTCCGGTCATCCATAGCTCACGTCAATCAGAATCAGAACGGCGGTTCACTTCAGGGCATGCCAGTTTCTGTAGGGCTTGACCATTTACAACCCAACAAGGCTGTGAGTTCTGTTCAAGGTCCCACCACTGGTTTTGATGATAAAACAATGTCTCTCATCTCAAACAAGTTGTCTGATCCGAGAGCAGGAGTAGGCTCTAGTTGCTCTAGACCTCCACTGATGGGTATAGCGTCCAATGGCTTGTTGTTAGAACCGAATTCCCAAGGCTCGCAAGGTGGGAGAGGTTATGAGAATCTTACTTCAGTAGCCTCTCAACACTCAGAATTTTCTTTGCCTTTGATGGATAATCATAATGGAAGGTGTAATGATAATTGGCCAAGTGCTGTGCAGTCATCTGGGATGCCCACTAATTCTTACCCAACAAGAGATTGTCTTCATGGAGGGAATCCAAGTGGTGCTTCTTCCATCACCTCACTTTCCACTCAGTCCCACGATTCGCTTGCAGATATGCAATCCCATGGACCCATTTTTACTAATAACAACACCACACCAAACTTGGCTTATCAAGGGTGGGATGATCATTCATTAGACTCTCTGATTCCTGTAAATGGAGGTCTTGGTGCATCGGGATTACACAGAAACTTGGACTATAGTTTTGGCAATCCCTTAGAAATGAAGCATGAGGGGTTCATTAAATCAGCCCAAGACCCCTCACTGAAGTCAAATCAAGGATATATCATGGACCCCCATAAAGCACAACGGAGTCGCATCTCTAGTAATAATCTTGGTTCATTGGAGGACTTGGTCAGTGCAATGATGAAACAGGAGCAAGACTTCATATGTGATGACTTCACTGGTGGAACATCAATGTGA 1953 0.4475 MTVETRADEPRGQFPVGMRVLAVDDDPTCLLVLETLLRRCQYHVTTTNQAITALKMLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDTKLVMKGISHGACDYLLKPVRIEELKNIWQHVIRRKKFDPKEKNSTCNQDKPQSGTTNNGLSSAGAGSTDLNAKLNKKRKDQDDEDDDEQEHGHDNDDPSTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLSRENVASHLQKYRLYLKRISCVANQQANMVAALGSADASYLRVGSLGGMKHLQPLGASGQFQNNVYRSLPYSGMIGRLNTPAGLGVHGLPSSGILQLGHAQNLNNSSGNSMNDPLKFRSSIAHVNQNQNGGSLQGMPVSVGLDHLQPNKAVSSVQGPTTGFDDKTMSLISNKLSDPRAGVGSSCSRPPLMGIASNGLLLEPNSQGSQGGRGYENLTSVASQHSEFSLPLMDNHNGRCNDNWPSAVQSSGMPTNSYPTRDCLHGGNPSGASSITSLSTQSHDSLADMQSHGPIFTNNNTTPNLAYQGWDDHSLDSLIPVNGGLGASGLHRNLDYSFGNPLEMKHEGFIKSAQDPSLKSNQGYIMDPHKAQRSRISSNNLGSLEDLVSAMMKQEQDFICDDFTGGTSM 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00803 650 CDD REC_typeB_ARR-like 20 134 - -
Accr3g00803 650 Gene3D - 17 154 - -
Accr3g00803 650 SMART REC_2 18 130 IPR001789 GO:0000160
Accr3g00803 650 FunFam Two-component response regulator 18 172 - -
Accr3g00803 650 SUPERFAMILY Homeodomain-like 202 262 IPR009057 -
Accr3g00803 650 Pfam Response regulator receiver domain 20 128 IPR001789 GO:0000160
Accr3g00803 650 MobiDBLite consensus disorder prediction 140 205 - -
Accr3g00803 650 Gene3D - 201 264 - -
Accr3g00803 650 MobiDBLite consensus disorder prediction 148 171 - -
Accr3g00803 650 PIRSF RR_ARR_type-B 1 649 IPR017053 GO:0003677|GO:0003700|GO:0009736
Accr3g00803 650 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 202 261 IPR017930 -
Accr3g00803 650 NCBIfam myb-like DNA-binding domain, SHAQKYF class 205 258 IPR006447 GO:0003677
Accr3g00803 650 MobiDBLite consensus disorder prediction 506 527 - -
Accr3g00803 650 Pfam Myb-like DNA-binding domain 207 257 IPR001005 -
Accr3g00803 650 SUPERFAMILY CheY-like 17 140 IPR011006 -
Accr3g00803 650 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 371 IPR045279 GO:0009736
Accr3g00803 650 FunFam Two-component response regulator 201 264 - -
Accr3g00803 650 ProSiteProfiles Response regulatory domain profile. 19 134 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00803 Accr-Chr3 8953542 8956557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00803 1 647 Response Regulator Gene Family AT2G25180 44.327 1.09e-132 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Accr3g00803 Response_reg 4.9e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00803 K14491 - gmx:100809002 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00803 3 8953542 8956557 Accr4g00838 4 7849409 7853112 CCT