Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00793 ATGAAGACCAATCTTCTTCCTTTTCTGCTTCTCCTCCTTCTCCTCCTCCTTCATGATCCCATTTCTGTTTATGCTGCTGCAGGCCCTCCTGCTTCAATGGCTGCTTCTTCCCCAGGTATACAGGTGGAGAACGAAGAACACCATATGGATTTACACAGGAAGATGGTAATAGCGCTCGCTGTTGTTAGTACAGCACTTGTTGTTGTCATTTTTGGCTTCTTATGCTTCTGGATTTACAGTAGGAAGCATCTATCCAAACCCAATAGGAAAAGCGTTCCCAACCCAGATGCTGAGAAAGGGGTTGCGCTTGCTCCATTTTTGAGTAAATTCAGTTCCGTAAAAATGGTTGGGAAAAAAGGGTATCTTCCAATGATTGATTATAAGCAAATAGAAAAGGCAACCAACAATTTCCAGGAAAGTAACATCTTGGGGCAGGGTGGATTTGGATGCGTATACCAGGCTCGGTTGGATGATAATCTAGATGTTGCCGTCAAGAAACTGCACTGTGAAACTCAAATTGCTGGGAGAGAATTCGAGAACGAGGTGAATTTGTTAAGTGAAATTCGGCATCCAAATATAATCTCTATACTCGGTTGCAGCGAAAATGAGGACAAGAGGTTCATTGTCTATGAATTGATGAAAAACGGATCCCTGGAAGCTCAATTACACGGACCCTCTCGTGGTGCGGCATTGACTTGGCATATGAGAATGAAAATTGCTCTTGACACAGCAAGAGGATTAGAATACCTCCATGAGCACCGTAAGCCTGCAGTGATCCATAGAGATCTGAAATCATCTAATATCCTTCTAGATGAGAACTTCAATGCAAAGCTGTCTGATTTCGGGCTGGCCATAGTGGATGGGTCCCAGAGCAAGAGCAACATAAAGCTGTCAGGCACATTGGGGTACGTTGCACCCGAGTATCTCTTAGATGGAAAACTGACAGATAAAAGTGATGTGTATGCATTTGGGGTAGTGCTTCTGGAGCTTCTGCTGGGAAGGAAGCCAGTGGAGAAATTGTCACCATGTCATTGCCAATCGATTGTCACATGGGCGATGCCACAGCTCACAGACAGATCAAAGCTTCCAAACATAGTAGATCCTGTGATCAAGGACGCCATGGACCTCAAGCATTTATACCAGGTTGCAGCAGTGGCGGTGTTGTGCGTGCAACCAGAACCAAGTTATAGGCCGTTGATCACAGATGTGTTGCACTCTCTGGTGCCTCTGGTTCCGGTGGATCTTGGCGGAACTCTCAGACTCTCAAATGTGGCCCACCACTCTGTCATGTCGTGA 1296 0.456 MKTNLLPFLLLLLLLLLHDPISVYAAAGPPASMAASSPGIQVENEEHHMDLHRKMVIALAVVSTALVVVIFGFLCFWIYSRKHLSKPNRKSVPNPDAEKGVALAPFLSKFSSVKMVGKKGYLPMIDYKQIEKATNNFQESNILGQGGFGCVYQARLDDNLDVAVKKLHCETQIAGREFENEVNLLSEIRHPNIISILGCSENEDKRFIVYELMKNGSLEAQLHGPSRGAALTWHMRMKIALDTARGLEYLHEHRKPAVIHRDLKSSNILLDENFNAKLSDFGLAIVDGSQSKSNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLSPCHCQSIVTWAMPQLTDRSKLPNIVDPVIKDAMDLKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLVPLVPVDLGGTLRLSNVAHHSVMS 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00793 431 SUPERFAMILY Protein kinase-like (PK-like) 122 405 IPR011009 -
Accr3g00793 431 Pfam Protein kinase domain 137 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00793 431 Gene3D Phosphorylase Kinase; domain 1 103 212 - -
Accr3g00793 431 FunFam probable receptor-like protein kinase At1g80640 213 412 - -
Accr3g00793 431 ProSiteProfiles Protein kinase domain profile. 137 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00793 431 SMART serkin_6 137 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00793 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Accr3g00793 431 Gene3D Transferase(Phosphotransferase) domain 1 213 412 - -
Accr3g00793 431 FunFam Protein kinase superfamily protein 104 212 - -
Accr3g00793 431 ProSitePatterns Protein kinases ATP-binding region signature. 143 166 IPR017441 GO:0005524
Accr3g00793 431 PANTHER OS01G0750732 PROTEIN 39 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00793 Accr-Chr3 8794031 8796955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00793 42 411 Receptor kinase-like Gene Family AT3G58690 44.297 2.28e-101 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Accr3g00793 Pkinase 4.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00793 - - qsa:O6P43_015740 636.336