Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00758 ATGGAGCTTCAGTTAGGTTTGGCTCTCCCAACTCAGAATCCTATCCAGGGACTCAACCTAACCAACAATGGCTTGGAGTGTTCAGAGTTGAGGAGGCCCAGTTTCTGTATTGAAAGCCACAGGCATGTCAAAAACAAGCGTAGCTTTGAAGAGTCATTTGAATATTCTTCAAAATCTCTGCCTTTACTGGTATGGAATGGACAGCCAAACGATGAAGATGACCGTGGTGGGAAGAGAAACAGAAACGCTCATCCAGCAAACGAGAATAACGAAGAAGAAAACCGTTTAGTGGGATGGCCACCCATTAAATCATGTAGAAAGAAGAAAATCCACCAACAACACCCAAGATTCCCGATCAGGAACGCTGGTGGGATGCTAGCTGAGAATGGAGATAGAGGATCAAACTCTTCATATGTTAAGGTTAAGATGGCAGGAGTAGCTGTCGGACGAAAAATCGATTTGAGGCTTTACAGCTCTTACGAGACTCTTACAAACAAGTTATTTAGCATGTTTAATAAATGCCAGAAGCCTGAGGAAGAGAAGGAAAGTTTTACACTTACATATCAAGCCGAAGAAGGGGACTGGCTGGTTGCTGGAGATGTTCCCTGGCAATCCTTCATTGACTCTGTGAAACGCTTGGAGATAGTAAGGAGTGGTGTTGCAGAATCCACATGA 675 0.44 MELQLGLALPTQNPIQGLNLTNNGLECSELRRPSFCIESHRHVKNKRSFEESFEYSSKSLPLLVWNGQPNDEDDRGGKRNRNAHPANENNEEENRLVGWPPIKSCRKKKIHQQHPRFPIRNAGGMLAENGDRGSNSSYVKVKMAGVAVGRKIDLRLYSSYETLTNKLFSMFNKCQKPEEEKESFTLTYQAEEGDWLVAGDVPWQSFIDSVKRLEIVRSGVAEST 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00758 224 ProSiteProfiles PB1 domain profile. 136 223 IPR000270 GO:0005515
Accr3g00758 224 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 3 218 IPR003311 GO:0005634|GO:0006355
Accr3g00758 224 MobiDBLite consensus disorder prediction 71 91 - -
Accr3g00758 224 Gene3D - 131 224 - -
Accr3g00758 224 MobiDBLite consensus disorder prediction 64 95 - -
Accr3g00758 224 Pfam AUX/IAA family 39 218 IPR033389 -
Accr3g00758 224 SUPERFAMILY CAD & PB1 domains 133 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00758 Accr-Chr3 8397976 8399029 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00758 101 218 B3 DNA Binding Superfamily AT3G61830 32.203 1.92e-12 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Accr3g00758 AUX_IAA 1.6e-34 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00758 K14484 - gmx:100802759 224.942