Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00742 ATGCCAAAAGCAAACAAGTTCAGAGGCGTGAGGCAGCGCCAGTGGGGCTCCTGGGTGTCAGAAATTCGCCACCCATTACTGAAGAGACGTGTATGGCTGGGGACATTTCAGACGGCGGAGGCAGCTGCCAGGGCATACGACCAAGCTGCGATATTGATGAATGGTCAAAATGCCAAGACCAATTTCCCCAGCTCAATGTATCGTCACCCGCAAGACAACACTACTACTGCTTCTTTATCTCCCAAGGCTCTCTCGGACTCACTCAGCACGAAGCTTAAAAAGTGTTGCAAAGCTCCGTTGTCGTCTCCTTCCCTCACATGTCTCAGGCTTGACGCTGACAATTCTCATATTGGTGTGTGGCAGAAAGGAGCTGGACCACGTTCTGGCTCTAACTGGGTCGTCAGGGTGGAGCTCGGCAACAAGGATCACCATCATCAGGTCAGGGACGAGTCTGATAATTCGTCGGTGACGACGTCATCGTCGGTGCCGGAGAATGGTGCACCGGCAGGTAATGTGGTGGTGGATGAAGAAGACAGGATTGCAATGCAGATGATTGAAGAGCTGCTTAACTGGAACTATACTTGCTCTTCCACTGCTTCTCAGGAATAG 609 0.5172 MPKANKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFQTAEAAARAYDQAAILMNGQNAKTNFPSSMYRHPQDNTTTASLSPKALSDSLSTKLKKCCKAPLSSPSLTCLRLDADNSHIGVWQKGAGPRSGSNWVVRVELGNKDHHHQVRDESDNSSVTTSSSVPENGAPAGNVVVDEEDRIAMQMIEELLNWNYTCSSTASQE 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00742 202 MobiDBLite consensus disorder prediction 152 166 - -
Accr3g00742 202 CDD AP2 6 65 IPR001471 GO:0003700|GO:0006355
Accr3g00742 202 SUPERFAMILY DNA-binding domain 6 65 IPR016177 GO:0003677
Accr3g00742 202 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Accr3g00742 202 FunFam Ethylene-responsive transcription factor 2 5 64 - -
Accr3g00742 202 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Accr3g00742 202 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Accr3g00742 202 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 5 149 - -
Accr3g00742 202 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Accr3g00742 202 Pfam AP2 domain 6 55 IPR001471 GO:0003700|GO:0006355
Accr3g00742 202 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Accr3g00742 202 MobiDBLite consensus disorder prediction 139 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00742 Accr-Chr3 8293301 8294047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00742 1 200 AP2-EREBP Transcription Factor Family AT5G25390 56.716 4.29e-69 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr3g00742 AP2 5.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00742 - - lang:109326202 264.233