Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00729 ATGGCTTTCGCGGTTTCTCCACTGGTATGCACAAAATCTATGCCCGTTCACTGTTTCCCATCCGCCCGAAGCAAACGTTTCATTGTCGGTAGCCTGACTTTGTTACGCAGACCTTTATCCTTCCCCGTACTCGTATACCCTCGCGGTCGAGACCTCAGCTCTGCGATTGTCGCTGCGTCTTCTCGCAAAAAGAAAAAGAAGCAAAATTTGCCTCAGAACCATGTTAAAGTGGAGGATGAGGAAGAGGATGCTTTTGAGCTTCTTTTCAAGCAACTGGAAGAAGATCTAAAAAATGATGATACGCCCTTCAATGATAGCGATAATGAAATAACTGAGGAGGACCTTGTCAAGTTAGAACAGGAGTTATCGGATGCCGTGGGGGAAGATGATGAAGAAATGTTTTTCTCAGCCTCAAGTGATACAAAAATTGATGATGATGATAATGAAGAAGAGGAAGAAGGAGATGATGATGATGATTATAAAGGAGACGGTAGGCAAGTGAACCTTCGAAGCTGGCAACTACGGAAATTGGCTAAAGTTCTAAAAACTGGTCGTCGCAAAACTAGTATCAAAAGTCTTGCTGCCGAGCTTTTTCTTGATAGGGCTATTGTTCTTGAGTTGCTTCGTGAACCTCCTCCAAATCTTTTAATGATGAGTCTGTCATTACCTGATGAGCCGACAGCTCCAGTAGTAGAATCTGAAGCTAAACCCTCAGAGACTGTTCTTGAAGAAATACGCACAGATCATGAAGAGCTTGGGCCAGAGTCTAATGTACCTGTCCATGTTATGCAACGTAGATGGTCTGCTCAGAAGAGATTGAAAAGGTCACACGTTGACACTCTGGAAAGAATTTATAGGAGAACAAAGCGGCCCACTAATACAATGATCAGTAGCATCGTGCATGTGACCAACCTTCCTCGGAGTAGAGTTGTTAAATGGTTTGAAGATAAACGTGCAGAAGATGGTGTTTCCGAAGATCGTGTTCCATACCGGCGGTCTGTTGCCTAA 1008 0.4385 MAFAVSPLVCTKSMPVHCFPSARSKRFIVGSLTLLRRPLSFPVLVYPRGRDLSSAIVAASSRKKKKKQNLPQNHVKVEDEEEDAFELLFKQLEEDLKNDDTPFNDSDNEITEEDLVKLEQELSDAVGEDDEEMFFSASSDTKIDDDDNEEEEEGDDDDDYKGDGRQVNLRSWQLRKLAKVLKTGRRKTSIKSLAAELFLDRAIVLELLREPPPNLLMMSLSLPDEPTAPVVESEAKPSETVLEEIRTDHEELGPESNVPVHVMQRRWSAQKRLKRSHVDTLERIYRRTKRPTNTMISSIVHVTNLPRSRVVKWFEDKRAEDGVSEDRVPYRRSVA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00729 335 Gene3D - 266 327 - -
Accr3g00729 335 Pfam Homeodomain 272 319 IPR001356 GO:0003677
Accr3g00729 335 CDD homeodomain 267 319 IPR001356 GO:0003677
Accr3g00729 335 MobiDBLite consensus disorder prediction 129 164 - -
Accr3g00729 335 Coils Coil 108 128 - -
Accr3g00729 335 SUPERFAMILY Homeodomain-like 266 325 IPR009057 -
Accr3g00729 335 ProSiteProfiles 'Homeobox' domain profile. 264 324 IPR001356 GO:0003677
Accr3g00729 335 MobiDBLite consensus disorder prediction 143 159 - -
Accr3g00729 335 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 60 320 - -
Accr3g00729 335 SMART HOX_1 263 328 IPR001356 GO:0003677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Accr3g00729 Homeodomain 1.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00729 - - pcin:129303592 404.445