Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00727 ATGCTCATGGATTCTCCTGATGTTACGAAGAAAACCCCCATTTCCATCGCCACTGCCGATGCTGCAGCTTCTTCTGAATCTCCTCCTGTTCAAGAGTCCCCTTTTTTCAGCTTTGTAAACAATTTATCTCCAATAAAGTCTGTCAAGGCTTCTCGTGTTGCTCAAGATTTCCTAGGACTAAATTCTCCCCCTGTCGTCTTCACGTCACCACGTATTAATCCCCATCGTGCATCCAAGTTCTTGGAGAGGCCTCAATGCTCTCAATTAGCCAATTTAGAAATTTCTCGAAGTGCCAATGAAGTCAAGAGCCTTGCTGATAATCCTGTTGACTCTGACAAGTCTACTTCTCTATCGGCGGGATTTATAACTCATAGCAAGAGTTATTCAACTACTCAGCACTGCAGCTCTTCCCCGTGTGTAGAGTCTGTAGATGAATATTTGGCTGATCCTTCAGATATTGATCATACGTCTTCGGAACATTCAGTCAACCCCGACGTGAAACAATACAATGAGAATGCTGGATCATCAGTAAATGACTTAACTCACGCAAAGAAAGCCATATCAAAAGTTGATAACAAAAATGGTCCTGATGACAAGAGGAACGAACCTTTGCTTTTGTTAGAGGAGTCTGAAGCCAGCAATCTTGAAAAGCCGAGACTAGTTGATGAAGCAGAGGAGAGAGCTGTTGACTTGCCTTCTGAAGAATGTGCTAAGTTAGAGTCTCTTTTGTCTGCTGACCATGTTTTTGAGAAGGGATGTTCTGATGATTCAGTTGTCCAGTGCACTGGAAATGAAATGCAGGATCATCGTAATTGTATCTCTCAGTCGATGCTTGAGCCTTTGCTGGATGTAAAAGAATGTGAAGATGATGGCGAGATGGGTACAACCTCTTGTATAAGTGTACAGAACATGTCACAGGACATCACCAAGGCCAGCCAAAAGCACCGAGGCCTGCGTAGACGCTGCCTTCAGTTTGAGGAGGCTGTGTCAAGTAAGTTTGGAAATTTGAATAGCTTCCCGCTTCAAACCCATGTTCCCGAAGACTTAATACCATCAGCTAACTCCTCAGAGTCAAAAGATTTAGAAGCTTCTCATGTTGCATTAAACGAAACTACAAGTGAAGAGAGAATGGTCAAGCAGTCCAAACCTATCACTACCACATTTTCTCCACGGTGTAGTGAAAGTTTCCCTGTGAAATGTTCCAAGCCATCAGGCATCGGGTTGCACTTAAATAGCATTATAAATGCTATGCCCCATGGCTGTGCTGCATTTACAGGCATGAGACTAGCAGAGGGTTGTACAGGTTCACAAGGCGGGAAGTCAGTTACTTTACTAAGCTGCCGGAATGCTGAGGACTTAACGAGGGGCTTAATTTCATCAGAGATGGACGAGCAACCTTTAGTTGGCAATAAATGTGAGAGGAACGAAAGGAATGCTTCGATATGTACGGATTCTCTCCCCTCTGAGTCTCCGAGCTCCCTAGAACCTGCAAATTTGTCAATTCTTGTTGATCATCCAGCACGTTTTCAAGAAGAGAGAAAATCAAGCTCTATAGGTGATGGAAAATTTGAGGATTCCAATCAAACAAGCCCCAAAAAGAAAAAGAAGAAAACTTCGAACCCCACCGATGATGACGGTTGTAAAAGGTGCAACTGTAAGAAGAGTAAATGTTTAAAACTTTACTGTGATTGTTTTGCAGCCGGATTATTTTGTGCTGAGTCTTGTGCTTGTCAAGACTGCTTCAATAGACCAGAACATGGAAATTTGGTTCTTGAGACAAGGCAGCAAATAGAAACCCGTAACCCACTTGCATTTGGCCCCAAGATTGTGCAGCATGTTACTGACTTTCCTTCAAATAATATGGACGATACCAATATAACGACACCATCATCGGCAAGACATAAAAGAGGTTGCAACTGCAAAAAGTCAATGTGTCTGAAAAAATATTGTGAATGTTATCAGGCTAATGTCGGATGCTCCAGTGGATGTCGATGTGAGGGATGCAAGAATGTCTATGGCAGGAAAGAAGAATTCGTTACTATTGAACATGCTTTGAGTGAAGAAAGAAGAAACAGAGCAGAAGAAGGATCAAATAGCACTCTTCACAGAGAGCTGGAAACTGAGGCAAAGAAGACGGATTTGTTACATGGAGAGTTGTATGATCTGCACTGCCTTTCTCCTCTAACACCGTCTTTGCAATACTCAGACCAAGGAAAGCAAGCTGCAAATTTACGAGCTCCTTCTGGGAAATATCTTCCGGCCACTAAGATAACAAATGCCTCTCGTGATTGGCCACAAGATGGCAACAACATAGAAGTAACGGATCAATCATCGCCAAGATTTAAATCCGTTGCCAAAGTAGGCCAGCATACAATTTCTCATTCTCAGTCAATGTTTAGTGCTTCTTTGTCAACTAAATCAAGGGATCAGACACATATTCCCCGTGTTCTATGTGGCGGTTCCCTTCGTTGGCGTACTTCACCAATCACCCCAATGACTAAATTAGGTGAAACTAAATCTCTACAGTGTCTTGAATCAAATAGCAGACTTTATGACATTCTAGAAGACGAAACTCCTGAGATGTTGAAGGAAGCTTCGACTCCCATGAAGTCTGTGAAAACAAGTTCCCCTAAGCAGAAGCGAGTATCTCCTCCTCACGGTCATCTAAGTGAACTTGGTTCAGGCTCTTCAGGAGGCTTGAGAAGTGGCCGGAAATTTATATTGAAAGCTGTACCTTCGTTCCCACCACTAACCCCATGTATTACTTCGAAAGAAAATGGTCATGAGAATTCAGAGAATAGCAATCAAGTGACCGACGATCCCAAAAGCTAA 2832 0.4283 MLMDSPDVTKKTPISIATADAAASSESPPVQESPFFSFVNNLSPIKSVKASRVAQDFLGLNSPPVVFTSPRINPHRASKFLERPQCSQLANLEISRSANEVKSLADNPVDSDKSTSLSAGFITHSKSYSTTQHCSSSPCVESVDEYLADPSDIDHTSSEHSVNPDVKQYNENAGSSVNDLTHAKKAISKVDNKNGPDDKRNEPLLLLEESEASNLEKPRLVDEAEERAVDLPSEECAKLESLLSADHVFEKGCSDDSVVQCTGNEMQDHRNCISQSMLEPLLDVKECEDDGEMGTTSCISVQNMSQDITKASQKHRGLRRRCLQFEEAVSSKFGNLNSFPLQTHVPEDLIPSANSSESKDLEASHVALNETTSEERMVKQSKPITTTFSPRCSESFPVKCSKPSGIGLHLNSIINAMPHGCAAFTGMRLAEGCTGSQGGKSVTLLSCRNAEDLTRGLISSEMDEQPLVGNKCERNERNASICTDSLPSESPSSLEPANLSILVDHPARFQEERKSSSIGDGKFEDSNQTSPKKKKKKTSNPTDDDGCKRCNCKKSKCLKLYCDCFAAGLFCAESCACQDCFNRPEHGNLVLETRQQIETRNPLAFGPKIVQHVTDFPSNNMDDTNITTPSSARHKRGCNCKKSMCLKKYCECYQANVGCSSGCRCEGCKNVYGRKEEFVTIEHALSEERRNRAEEGSNSTLHRELETEAKKTDLLHGELYDLHCLSPLTPSLQYSDQGKQAANLRAPSGKYLPATKITNASRDWPQDGNNIEVTDQSSPRFKSVAKVGQHTISHSQSMFSASLSTKSRDQTHIPRVLCGGSLRWRTSPITPMTKLGETKSLQCLESNSRLYDILEDETPEMLKEASTPMKSVKTSSPKQKRVSPPHGHLSELGSGSSGGLRSGRKFILKAVPSFPPLTPCITSKENGHENSENSNQVTDDPKS 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00727 943 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 21 924 IPR044522 GO:0003700
Accr3g00727 943 MobiDBLite consensus disorder prediction 510 546 - -
Accr3g00727 943 ProSiteProfiles CRC domain profile. 546 673 IPR005172 -
Accr3g00727 943 MobiDBLite consensus disorder prediction 919 943 - -
Accr3g00727 943 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 636 670 IPR005172 -
Accr3g00727 943 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 548 583 IPR005172 -
Accr3g00727 943 Coils Coil 301 321 - -
Accr3g00727 943 MobiDBLite consensus disorder prediction 862 943 - -
Accr3g00727 943 SMART CXC_2 545 586 IPR033467 -
Accr3g00727 943 SMART CXC_2 633 674 IPR033467 -
Accr3g00727 943 MobiDBLite consensus disorder prediction 150 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00727 Accr-Chr3 8134357 8139172 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00727 525 676 CPP Transcription Factor Family AT3G22760 61.438 5.20e-59 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Accr3g00727 TCR 3.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00727 K21776 - qsa:O6P43_019426 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00727 3 8134357 8139172 Accr3g00727 3 8134357 8139172 ECH