Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00702 ATGGCCATGCTGAGAATGGCACAGCATAACAATGGTAATCACTGTTCGAGCCAACAGTCAGTGAAATCAGTCTTTCATGACTTTATGGGCATGAAGCCCACTGATTCGCCTCTCGTTGCGGCCCCTAAAACCACTGAAGCGAGGCCGTCGCCATCGTCGGCATCGGTCTCTGTTGGTGCCTCTTCCGGTGTTGCCCGTGGCCCCCTCTCAACCATCTCTGATATCGCTTCTGAAAGACAGTTAGGAAACCACCTCGAGGGAGTCCCATTCTATTGCCCGAGGAGTGATCTTTCTGGCACTGAGATTAGTAACAGAATACTAGGAAACAAGAGAAGTAATTCTGATTCCAGTTTTATGAGTTCCTCCAGAGATGCCTTCCGAATGGTTCCTGACTCTATTCAAAATTTGCATTTATTGAAGTCAAGGAAGCCTACTTCTGCTTCTCTCACATATCAGCCTTCAACGGGCACTAAGACTGATTTCAATAAATGGGAGCGATCTGTTCTCATGAATACTGGCTCTTCCATGCAGCATCCACCACATGGGGATGAAGGATCTAGAACAGGAATCAAGGGCCCTGGGATCTTGAGTTCTGTAAACACTACCTCTGCTGCTTATGAGAAATCTCTGTCTGCACTTGGCGGGAGCAGGCCAAAACCATTGACTAGTATAATAGACCCAGAATCTTCCATGCCTCCTAGTCAACAAGGGTTAGCATCTTCCAGCTGCCAGATGACTATTTTTTACGGAGGTCAAGCTCACGTTTTTGATAATGTCCACCCCAATAAGGCAGAAATTATAATGGCTCTAGCTGGGTCAAATGGTGGATGTTGGTCCACAACATACTCCCCAAAACCTACTGCGAAGCTCACTAATGACAGTAACATGCTGTGTGGAGATAGTGAAACTGGTATAGTGAGTAAGATTACACCCCCACAGGAGCCTCATGGCAGATTATCTTTCGCCGGCACTTCTAGTCTTGCCATCAAATCTGGCAATCGGCTGTCTACTCAAGCAGGGGCACATCAGGGAAGCTTTGTAGCCAAAGAAGATGTTAGGAATTCGATTAAAGCATCAGACCACAGTTCTGAGGACAAAAGGACGCAATCACATTGA 1116 0.4677 MAMLRMAQHNNGNHCSSQQSVKSVFHDFMGMKPTDSPLVAAPKTTEARPSPSSASVSVGASSGVARGPLSTISDIASERQLGNHLEGVPFYCPRSDLSGTEISNRILGNKRSNSDSSFMSSSRDAFRMVPDSIQNLHLLKSRKPTSASLTYQPSTGTKTDFNKWERSVLMNTGSSMQHPPHGDEGSRTGIKGPGILSSVNTTSAAYEKSLSALGGSRPKPLTSIIDPESSMPPSQQGLASSSCQMTIFYGGQAHVFDNVHPNKAEIIMALAGSNGGCWSTTYSPKPTAKLTNDSNMLCGDSETGIVSKITPPQEPHGRLSFAGTSSLAIKSGNRLSTQAGAHQGSFVAKEDVRNSIKASDHSSEDKRTQSH 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00702 371 ProSiteProfiles Tify domain profile. 238 273 IPR010399 -
Accr3g00702 371 Pfam tify domain 241 272 IPR010399 -
Accr3g00702 371 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 98 311 IPR040390 -
Accr3g00702 371 MobiDBLite consensus disorder prediction 46 61 - -
Accr3g00702 371 MobiDBLite consensus disorder prediction 336 371 - -
Accr3g00702 371 MobiDBLite consensus disorder prediction 40 61 - -
Accr3g00702 371 SMART tify_2 238 273 IPR010399 -
Accr3g00702 371 MobiDBLite consensus disorder prediction 353 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00702 Accr-Chr3 7896843 7902829 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00702 6 340 Tify Gene Family AT4G32570 39.892 8.63e-42 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Accr3g00702 tify 5.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00702 - - qsa:O6P43_015637 399.823