Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00701 ATGGCCATGCTGAGAATGGCACAGCATAACAATGGTAATCACTGTTCGAGCCAACAGTCAGTGAAATCAGTCTTTCATGACTTTATGGGCATGAAGCCCACTGATTCGCCTCTCGTTGCGGCCCCTAAAACCACTGAAGCGAGGCCGTCGCCATCGTCGGCATCGGTCTCTGTTGGTGCCTCTTCCGGTGTTGCCCGTGGCCCCCTCTCAACCATCTCTGATATCGCTTCTGAAAGACAGTTAGGAAACCACCTCGAGGGAGTCCCATTCTATTGCCCGAGGAGTGATCTTTCTGGCACTGAGATTAGTAACAGAATACTAGGAAACAAGAGAAGTAATTCTGATTCCAGTTTTATGAGTTCCTCCAGAGATGCCTTCCGAATGGTTCCTGACTCTATTCAAAATTTGCATTTATTGAAGTCAAGGAAGCCTACTTCTGCTTCTCTCACATATCAGCCTTCAACGGGCACTAAGACTGATTTCAATAAATGGGAGCGATCTGTTCTCATGAATACTGGCTCTTCCATGCAGCATCCACCACATGGGGATGAAGGATCTAGAACAGGAATCAAGGGCCCTGGGATCTTGAGTTCTGTAAACACTACCTCTGCTGCTTATGAGAAATCTCTGTCTGCACTTGGCGGGAGCAGGCCAAAACCATTGACTAGTATAATAGACCCAGAATCTTCCATGCCTCCTAGCAGTCAACAAGGGTTAGCATCTTCCAGCTGCCAGATGACTATTTTTTACGGAGGTCAAGCTCACGTTTTTGATAATGTCCACCCCAATAAGGCAGAAATTATAATGGCTCTAGCTGGGTCAAATGGTGGATGTTGGTCCACAACATACTCCCCAAAACCTACTGCGAAGCTCACTAATGACAGTAACATGCTGTGTGGAGATAGTGAAACTGGTATAGTGAGTAAGATTACACCCCCACAGGAGCCTCATGGCAGATTATCTTTCGCCGGCACTTCTAGTCTTGCCATCAAATCTGGCAATCGGCTGTCTACTCAAGCAGGGGCACATCAGGGAAGCTTTGTAGCCAAAGAAGATGTTAGGAATTCGATTAAAGCATCAGACCACAGTTCTGAGGACAAAAGGACGCAATCACATTGA 1119 0.4683 MAMLRMAQHNNGNHCSSQQSVKSVFHDFMGMKPTDSPLVAAPKTTEARPSPSSASVSVGASSGVARGPLSTISDIASERQLGNHLEGVPFYCPRSDLSGTEISNRILGNKRSNSDSSFMSSSRDAFRMVPDSIQNLHLLKSRKPTSASLTYQPSTGTKTDFNKWERSVLMNTGSSMQHPPHGDEGSRTGIKGPGILSSVNTTSAAYEKSLSALGGSRPKPLTSIIDPESSMPPSSQQGLASSSCQMTIFYGGQAHVFDNVHPNKAEIIMALAGSNGGCWSTTYSPKPTAKLTNDSNMLCGDSETGIVSKITPPQEPHGRLSFAGTSSLAIKSGNRLSTQAGAHQGSFVAKEDVRNSIKASDHSSEDKRTQSH 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00701 372 MobiDBLite consensus disorder prediction 337 372 - -
Accr3g00701 372 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 98 312 IPR040390 -
Accr3g00701 372 SMART tify_2 239 274 IPR010399 -
Accr3g00701 372 MobiDBLite consensus disorder prediction 354 372 - -
Accr3g00701 372 Pfam tify domain 242 273 IPR010399 -
Accr3g00701 372 MobiDBLite consensus disorder prediction 46 61 - -
Accr3g00701 372 MobiDBLite consensus disorder prediction 40 61 - -
Accr3g00701 372 ProSiteProfiles Tify domain profile. 239 274 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00701 Accr-Chr3 7896843 7902829 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00701 6 341 Tify Gene Family AT4G32570 39.674 1.21e-41 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Accr3g00701 tify 5.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00701 - - qsa:O6P43_015637 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00701 3 7896843 7902829 Accr4g00748 4 7175883 7180071 CCT