Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00700 ATGGCCATGCTGAGAATGGCACAGCATAACAATGGTAATCACTGTTCGAGCCAACAGTCAGTGAAATCAGTCTTTCATGACTTTATGGGCATGAAGCCCACTGATTCGCCTCTCGTTGCGGCCCCTAAAACCACTGAAGCGAGGCCGTCGCCATCGTCGGCATCGGTCTCTGTTGGTGCCTCTTCCGGTGTTGCCCGTGGCCCCCTCTCAACCATCTCTGATATCGCTTCTGAAAGACAGTTAGGAAACCACCTCGAGGGAGTCCCATTCTATTGCCCGAGGAGTGATCTTTCTGGCACTGAGATTAGTAACAGAATACTAGGAAACAAGAGAAGTAATTCTGATTCCAGTTTTATGAGTTCCTCCAGAGATGCCTTCCGAATGGTTCCTGACTCTATTCAAAATTTGCATTTATTGAAGTCAAGGAAGCCTACTTCTGCTTCTCTCACATATCAGCCTTCAACGGGCACTAAGACTGATTTCAATAAATGGGAGCGATCTGTTCTCATGAATACTGGCTCTTCCATGCAGCATCCACCACATGGGGGTCAGTTAGCATCTTTTGTGCACCAGATATCTTCTAACAAGAGCAGGGATGCTAATGCTGGTCCTTCATCTATTTCTCAATCTGCTGCAGATGAAGGATCTAGAACAGGAATCAAGGGCCCTGGGATCTTGAGTTCTGTAAACACTACCTCTGCTGCTTATGAGAAATCTCTGTCTGCACTTGGCGGGAGCAGGCCAAAACCATTGACTAGTATAATAGACCCAGAATCTTCCATGCCTCCTAGCAGTCAACAAGGGTTAGCATCTTCCAGCTGCCAGATGACTATTTTTTACGGAGGTCAAGCTCACGTTTTTGATAATGTCCACCCCAATAAGGCAGAAATTATAATGGCTCTAGCTGGGTCAAATGGTGGATGTTGGTCCACAACATACTCCCCAAAACCTACTGCGAAGCTCACTAATGACAGTAACATGCTGTGTGGAGATAGTGAAACTGGTATAGTGAGTAAGATTACACCCCCACAGGAGCCTCATGGCAGATTATCTTTCGCCGGCACTTCTAGTCTTGCCATCAAATCTGGCAATCGGCTGTCTACTCAAGCAGGGGCACATCAGGGAAGCTTTGTAGCCAAAGAAGATGTTAGGAATTCGATTAAAGCATCAGACCACAGTTCTGAGGACAAAAGGACGCAATCACATTGA 1209 0.4657 MAMLRMAQHNNGNHCSSQQSVKSVFHDFMGMKPTDSPLVAAPKTTEARPSPSSASVSVGASSGVARGPLSTISDIASERQLGNHLEGVPFYCPRSDLSGTEISNRILGNKRSNSDSSFMSSSRDAFRMVPDSIQNLHLLKSRKPTSASLTYQPSTGTKTDFNKWERSVLMNTGSSMQHPPHGGQLASFVHQISSNKSRDANAGPSSISQSAADEGSRTGIKGPGILSSVNTTSAAYEKSLSALGGSRPKPLTSIIDPESSMPPSSQQGLASSSCQMTIFYGGQAHVFDNVHPNKAEIIMALAGSNGGCWSTTYSPKPTAKLTNDSNMLCGDSETGIVSKITPPQEPHGRLSFAGTSSLAIKSGNRLSTQAGAHQGSFVAKEDVRNSIKASDHSSEDKRTQSH 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00700 402 MobiDBLite consensus disorder prediction 367 402 - -
Accr3g00700 402 Pfam tify domain 272 303 IPR010399 -
Accr3g00700 402 MobiDBLite consensus disorder prediction 384 402 - -
Accr3g00700 402 MobiDBLite consensus disorder prediction 195 215 - -
Accr3g00700 402 MobiDBLite consensus disorder prediction 46 61 - -
Accr3g00700 402 SMART tify_2 269 304 IPR010399 -
Accr3g00700 402 MobiDBLite consensus disorder prediction 40 61 - -
Accr3g00700 402 MobiDBLite consensus disorder prediction 240 269 - -
Accr3g00700 402 MobiDBLite consensus disorder prediction 195 227 - -
Accr3g00700 402 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 98 342 IPR040390 -
Accr3g00700 402 ProSiteProfiles Tify domain profile. 269 304 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00700 Accr-Chr3 7896843 7902829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00700 6 371 Tify Gene Family AT4G32570 40.933 5.94e-55 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Accr3g00700 tify 6.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00700 - - qsa:O6P43_015637 448.358