Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00692 ATGACTGTCAGATCGGCGCAATCATCGTTTCGGGATCGGACACAGGAATTTCAGAGTATAGCAGAGAGGCTAAAGAAGTCGGTCTCGTCCGGATCAGGGCCAAACGGGCCAAGCAGTAGTTCAAGATCGGAGGAACAGCGATCTGCGAACGCAATTCAGTCAGAATTCAATAGGAGGGCTTCCAAGATTGGTTATGGGATACATCAGACGTCACAGAAACTTGCTAAGCTGGCCAAGTTGGCAAAAAGGACTTCGGTGTTTGATGACCCCACTATGGAAATCCAAGAGCTCACAGCAGTTATTAAGCAAGATGTCTCTGCATTGAACTCTGCCGTTGTGGAACTGCAGCTAATCAGCAACGCTAGGAATGACAACGGAAATATCTCCAGTGACACAACTAGTCATTCAACCACAGTTGTGGATGACCTTAAAACCCGATTGATGAGCACTACAAAAGAGTTTAAAGAAATCCTCACCATGCGAACAGAGAACTTGAAGGTACATGAGAATAGAAGACAGTTGTTTTCTTCCACTGCCTCTAAGGAAGCTGCAAATCCTTTTGTTCGTCAACGTCCCTTGGCTGCAAAGTCAGCTGCCAATGCCCCTGCACCCCCATGGGCTAGTGGGTCAACATCTTCATCTCAGCTGTTTCCAAAGAAGCAAGTGGATGGGGAGGGTCAACCATTGCTGCAGCAGGAACAGCAGCAGCAGCAGCAATTGGTTCCATTGCAGGATTCATACATGCAGAGCAGAGCTGAAGCTCTTCATAATGTTGAGTCCACTATTCATGAGTTGAGCAGCATTTTTAATCAATTGGCAACACTCGTCTCCCAACAAGGGGAAATTGCCATCAGGATTGATGAGAACATGGACGATACGTTGGCAAATGTAGAAGGGGCGCAGGGGGCTTTGCTAAAATATCTGAACAGTATATCTTCTAATCGGTGGCTGATGATCAAGATATTCTTTGTTTTAATATTTTTTCTCATGGTTTTCCTATTTTTTGTGGCATAA 1014 0.4546 MTVRSAQSSFRDRTQEFQSIAERLKKSVSSGSGPNGPSSSSRSEEQRSANAIQSEFNRRASKIGYGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTAVIKQDVSALNSAVVELQLISNARNDNGNISSDTTSHSTTVVDDLKTRLMSTTKEFKEILTMRTENLKVHENRRQLFSSTASKEAANPFVRQRPLAAKSAANAPAPPWASGSTSSSQLFPKKQVDGEGQPLLQQEQQQQQQLVPLQDSYMQSRAEALHNVESTIHELSSIFNQLATLVSQQGEIAIRIDENMDDTLANVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00692 337 Pfam SNARE domain 281 333 IPR000727 -
Accr3g00692 337 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 7 26 IPR021538 -
Accr3g00692 337 SUPERFAMILY t-snare proteins 53 300 IPR010989 GO:0016020|GO:0016192
Accr3g00692 337 MobiDBLite consensus disorder prediction 194 221 - -
Accr3g00692 337 CDD SNARE_syntaxin5 248 326 - -
Accr3g00692 337 ProSitePatterns Syntaxin / epimorphin family signature. 251 290 IPR006012 GO:0005484|GO:0006886|GO:0016020
Accr3g00692 337 SMART tSNARE_6 240 307 IPR000727 -
Accr3g00692 337 MobiDBLite consensus disorder prediction 204 220 - -
Accr3g00692 337 MobiDBLite consensus disorder prediction 21 51 - -
Accr3g00692 337 PANTHER SYNTAXIN 53 329 IPR045242 -
Accr3g00692 337 Gene3D - 47 300 - -
Accr3g00692 337 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 245 307 IPR000727 -
Accr3g00692 337 FunFam Syntaxin-32 like 50 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00692 Accr-Chr3 7795644 7799486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00692 1 337 SNARE and Associated Proteins AT3G24350 66.205 8.41e-153 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00692 K08490 - gmx:100777961 450.669