Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00664 ATGTTCTCCGGGAGCCAGCTTGATGCCACTGCCGCCTTCTCAGGCGGCGGTTTCATGACCACGGAGTCTACCCAGATCAACGATTCATCTTCGTTACCGGCCAGAAGCCGTGAGACTCAGGGTTTAGTTCCGGTAACAGTAAAGCAGATAAGCGAAGCCTCTCAATCTGGTGATGAAAAGTCGAATTTCATAATCAACGGCGTGGATGTTACCAATGTAACCTTAGTTGGTATGGTATTTGAGAAAGTTGACCGAAACACTGACGTTAGTTTTGTTCTAGATGATGGAACAGGACGGATCAAAAGTCGAAGATGGGTGAATGAGCCTTTTGATACAAAGGAAATGGAACAAATACGAGATGGCATGTACGTTCGTGTAAATGGGCATTTGAAAAGCTTTCAAGGTGTAAAACAGGTTGTTGCTTTCTCAATCAGGCCAGTGATGAGTTTTGATGAGATTTCTTTTCACTTTATTGATTGTATACATAATCATCTACACGCAAAAGCAAAGGTTGAAGGAGTTACTCCTGCTCATCCTCCATCTATAAACTCATCCCAAGTATCAAATGGAACTCAAGCACCATCATCTAATCCATTATATGCACAATATAGCATGGATGGGCTTAAGGATTGTGATAAATTGGTCCTTGATTATCTCAATCAACACTCGGACATGTCTGATGATAGGGGAATACATGTTAATGAGCTGGCTAGAGAGCTTAAACTTCCATTGGAGAAGATCATGTTGGCATTGAAGGCCCTTGGTGACGATGGACTAGTATACTCCACCATTGATGACAATCATTACAAGCAGGCTTGA 819 0.4237 MFSGSQLDATAAFSGGGFMTTESTQINDSSSLPARSRETQGLVPVTVKQISEASQSGDEKSNFIINGVDVTNVTLVGMVFEKVDRNTDVSFVLDDGTGRIKSRRWVNEPFDTKEMEQIRDGMYVRVNGHLKSFQGVKQVVAFSIRPVMSFDEISFHFIDCIHNHLHAKAKVEGVTPAHPPSINSSQVSNGTQAPSSNPLYAQYSMDGLKDCDKLVLDYLNQHSDMSDDRGIHVNELARELKLPLEKIMLALKALGDDGLVYSTIDDNHYKQA 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00664 272 MobiDBLite consensus disorder prediction 176 196 - -
Accr3g00664 272 CDD RPA2_DBD_D 72 165 - -
Accr3g00664 272 PANTHER REPLICATION PROTEIN A-RELATED 6 270 IPR040260 -
Accr3g00664 272 Gene3D - 34 168 IPR012340 -
Accr3g00664 272 Pfam OB-fold nucleic acid binding domain 73 146 IPR004365 GO:0003676
Accr3g00664 272 FunFam Replication protein A 32 kDa subunit 203 272 - -
Accr3g00664 272 Gene3D - 202 272 IPR036388 -
Accr3g00664 272 FunFam replication protein A 32 kDa subunit A-like 35 169 - -
Accr3g00664 272 SUPERFAMILY Nucleic acid-binding proteins 42 167 IPR012340 -
Accr3g00664 272 SUPERFAMILY "Winged helix" DNA-binding domain 205 270 IPR036390 -
Accr3g00664 272 Pfam Replication protein A C terminal 182 267 IPR014892 -
Accr3g00664 272 PIRSF RPA32 1 272 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Accr3g00664 272 MobiDBLite consensus disorder prediction 178 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00664 Accr-Chr3 7476760 7480247 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00664 1 270 Core DNA Replication Machinery Family AT2G24490 47.653 4.58e-90 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00664 K10739 - qsa:O6P43_015598 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00664 3 7476760 7480247 Accr3g00664 3 7476760 7480247 ECH