Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00659 ATGGATGATTATTCCGGTAAACGAGCCATAGATGGGGTGGTAGTACCTAAAAAGGGGATGGCTCGTGTATTTAGAGATACTGCTAATGCTAGGGACCGTAATGGTCAGTTTTGCAGCCGATCTGGTTGCAGCAGTAGGGTGAATTCTCCCAAGGGTACTAAATTTGCGTCATCTGAGAAAGGTATATCTTCGAGGCCTCCAATCCGATCTTCAAGTCGTAAGGAAGCAGTTGGAAGTTCCTCTAGAACTTTACCAGGATCTTATAACCCAGGAAAATCCCCTACGGAGGCCCGGAAAACATTATCTTGCCAGTCAGAGACTGTTCCTTGTGAAACGAGTAGTTTGCAAGATGAATCAGAAATTTCTGAGCTTACACCACCACCTGGAAAAATTCGAAAAGGGCCTCAAGCTGAAGTGGGAAGTTCAGAGTCTACTAATCTCATATCAATGGAAGTAGGAAGCTCTAGCGTAGCATCAAAATCAACATATAGGAGGAATCTTCGTCAAAAGCCTGGATTGAATGGTCAAGAGTCTAATAAAAGCTCTGGCTCAGTGACACGAGCTGGAGGTAGCAGCTATGGGTTGAGGAACCTCAGATGCAATTCTATATCTGATGTAATCCCTTCAGGCTGTTCATCATCAGATTCAACCCAGAATAGAAGGAAAGATGTGATGAAAAGGAGGAACTGTGAAGGAGAAAGTAGTTCTACTGCTAGAGGTAAGAAGATCAGTGGACCTTCATTGGATGGACATAATTCTGGCTCCAGAAATGGTATATCAATATCAGATTCAAGAAGATCCAGAAACTTTCCTCCTCAAAGGGATAACAACAACATTGGATCAGTTAGAACTAGAAGATCTTTCAATGGTCATGGCAGGGGAAGGCTTCCCAGCCAACCAAATGAAAACCCTGCACCACCCAGTGAATCCCCTATTACCATATCATCTTTGCCTCATTCCAGTGACCTTAATGCTCATGATTTATTACATCATTCCTCGTTGGAGACTCCCCTCAGAAGTCCAAGATCTTACAGTAGACCAGGTAGTAGCAGTGAGAGGTTATTTGGTGTTTTGCCCCCGTCTCCGTCAGAATATGGGATCACTCGTTCTCTCATGAACCGGGACAGCTTTCTACGCTTTAACGTGGATGGTATTGCGGAGGTATTATTGGCACTTGAGAGGATTGAACAAGATGAAGATCTTTCACATGAGCAAATCCTGTTACTAGAGACCAACTTGTTGCTTCATGGACTAAACTTCTATGATCAACATAGAGACATGCGATTGGATATTGATAACATGTCATACGAGGAACTATTGGCTTTGGAAGAGAGGATGGGTTCTGTGAGCACAGCTCTAACAGAGGAAGCACTTTCAGAATGCCTTAAAACAAGTTTCTACCAACCTGCCACTTCAGATGATGCAGCCGTGAGCTGCGATGAGGATAAGGATGACATCAAATGCAGCATCTGCCAGGAGGAATATGTGGAAGCTGAGGAAGTGGGGAGTCTAAAATGCGAGCATAGGTATCATGTGGGATGCATACAGCAATGGCTGCGCCTCAAGAACTGGTGTCCAATTTGCAAAGCTTCTGCGGCACCATCACATTCCTCTTCTTCAACTTCAACCCCTTGA 1635 0.4428 MDDYSGKRAIDGVVVPKKGMARVFRDTANARDRNGQFCSRSGCSSRVNSPKGTKFASSEKGISSRPPIRSSSRKEAVGSSSRTLPGSYNPGKSPTEARKTLSCQSETVPCETSSLQDESEISELTPPPGKIRKGPQAEVGSSESTNLISMEVGSSSVASKSTYRRNLRQKPGLNGQESNKSSGSVTRAGGSSYGLRNLRCNSISDVIPSGCSSSDSTQNRRKDVMKRRNCEGESSSTARGKKISGPSLDGHNSGSRNGISISDSRRSRNFPPQRDNNNIGSVRTRRSFNGHGRGRLPSQPNENPAPPSESPITISSLPHSSDLNAHDLLHHSSLETPLRSPRSYSRPGSSSERLFGVLPPSPSEYGITRSLMNRDSFLRFNVDGIAEVLLALERIEQDEDLSHEQILLLETNLLLHGLNFYDQHRDMRLDIDNMSYEELLALEERMGSVSTALTEEALSECLKTSFYQPATSDDAAVSCDEDKDDIKCSICQEEYVEAEEVGSLKCEHRYHVGCIQQWLRLKNWCPICKASAAPSHSSSSTSTP 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00659 544 MobiDBLite consensus disorder prediction 138 218 - -
Accr3g00659 544 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 71 533 IPR045191 GO:0061630
Accr3g00659 544 MobiDBLite consensus disorder prediction 336 350 - -
Accr3g00659 544 MobiDBLite consensus disorder prediction 308 322 - -
Accr3g00659 544 SMART ring_2 488 528 IPR001841 -
Accr3g00659 544 Pfam Ring finger domain 487 529 IPR001841 -
Accr3g00659 544 MobiDBLite consensus disorder prediction 32 121 - -
Accr3g00659 544 MobiDBLite consensus disorder prediction 27 359 - -
Accr3g00659 544 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 446 534 IPR013083 -
Accr3g00659 544 ProSiteProfiles Zinc finger RING-type profile. 488 529 IPR001841 -
Accr3g00659 544 SUPERFAMILY RING/U-box 481 533 - -
Accr3g00659 544 MobiDBLite consensus disorder prediction 219 235 - -
Accr3g00659 544 FunFam E3 ubiquitin-protein ligase arkadia 450 534 - -
Accr3g00659 544 MobiDBLite consensus disorder prediction 236 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00659 Accr-Chr3 7405930 7408259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00659 385 532 C3H Transcription Factor Family AT2G15530 43.624 1.45e-35 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00659 - - gmx:100819874 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00659 3 7405930 7408259 Accr3g00659 3 7405930 7408259 ECH