Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00653 ATGGCGGTGGAGCTTTTGAGATTTCCGAAAATGGACGAGCAGAAAGCAATTCAGGAGGCTGCATCGGACGGATTGAAGGGTATGGAGAATCTAATCCGTCAGCTATCTCACAAACCCAATCTCGTCGACTGTGCCGATCTCACCGATGTTACTGTTTCTAATTTTAAGAAACTTATCTCTCTTCTAAATCGCACTGGCCATGCCCGATTCAGAAGAGCCCCGATCTCCTCCTCTTCCAGCTCGTCTCCCCCTTCCACTTCCAAGTTGCCGCCGCCATCATCCGCCGCGCCCTCTTCGGCCAACATTTCCCAATCTCAAATTCCGAAACTATCACCGGCGCAGTTCACCTCTCCGGCGCCGATCGCAAATCCGGTAACCGTGCATCACGCTCCGATCAACAACAGCTCTGCTCCATCTGGTTTTGTTCCGGCTCATTCACAGTCTTTGACTCTCGATTTCACAAAGCCTAATATATTGAGCTCCAACGCGAAGCCCCTCGAGCTGGAGTTCTCTAAGGAAACCTTCAGCGTGTCTTCAAACTCATCTTTCATGTCGTCAGCCATCACCGGCGACGGTAGCGTATCGAACGGCAAACAAGGATCGTCGATCTTCCTTACACCGACGGCGCCAACGGTCTCCGGCAACGGGAAGCCACCCTTATCGACGGTATCGAAGAAGAGATGCCACGACCACCGTGAGCACTCCGAAGATCTATCCGGCTCCAGCAAGTGCCACTGCTCAAAAAGAAGGAAGAATCGGATGAAGAAGGTGGTACGAGTGCCGGCGATTAGTTCGAAGGTCGCGGACATTCCGCCGGACGAGTACTCGTGGAGGAAGTACGGTCAGAAGCCGATCAAGGGATCACCGTACCCAAGGGGTTACTACAAGTGCAGTACAGTAAGAGGTTGTCCGGCGAGGAAACATGTAGAGCGGGCCCTGGATGATCCGACGATGCTGATTGTAACCTATGAGGGGGAGCACCGTCACGCGTTGCAGGCCGTGATGCAGGAAAACGGAGCCGGAGGGATCGGGCTGGTACTTCAGTGA 1047 0.5368 MAVELLRFPKMDEQKAIQEAASDGLKGMENLIRQLSHKPNLVDCADLTDVTVSNFKKLISLLNRTGHARFRRAPISSSSSSSPPSTSKLPPPSSAAPSSANISQSQIPKLSPAQFTSPAPIANPVTVHHAPINNSSAPSGFVPAHSQSLTLDFTKPNILSSNAKPLELEFSKETFSVSSNSSFMSSAITGDGSVSNGKQGSSIFLTPTAPTVSGNGKPPLSTVSKKRCHDHREHSEDLSGSSKCHCSKRRKNRMKKVVRVPAISSKVADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERALDDPTMLIVTYEGEHRHALQAVMQENGAGGIGLVLQ 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00653 348 MobiDBLite consensus disorder prediction 207 246 - -
Accr3g00653 348 MobiDBLite consensus disorder prediction 72 117 - -
Accr3g00653 348 Gene3D WRKY domain 256 331 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr3g00653 348 SUPERFAMILY WRKY DNA-binding domain 269 331 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr3g00653 348 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 333 IPR044810 GO:0003700
Accr3g00653 348 Pfam WRKY DNA -binding domain 273 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g00653 348 SMART WRKY_cls 271 331 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g00653 348 MobiDBLite consensus disorder prediction 223 244 - -
Accr3g00653 348 FunFam WRKY transcription factor 65 255 332 - -
Accr3g00653 348 Pfam Plant zinc cluster domain 225 269 IPR018872 -
Accr3g00653 348 MobiDBLite consensus disorder prediction 92 117 - -
Accr3g00653 348 ProSiteProfiles WRKY domain profile. 266 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00653 Accr-Chr3 7337953 7339481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00653 1 347 WRKY Transcription Factor Family AT2G24570 57.939 3.91e-118 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr3g00653 WRKY 1.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00653 - - qsa:O6P43_019342 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00653 3 7337953 7339481 Accr3g00653 3 7337953 7339481 ECH