LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr3g00642	ATGTGGTTGCCGAAGCATCAACCAGAGAAGAAGGATGGAGTTCAGGGGATAGTGGCAGTGGCAATAGACAGAGACAAAGGAAGCCAGAATGCACTCAAATGGGCCATTGATCATCTTCTTGTACGAGGATCCACCGTAGTTCTTATCCATGTCAAGGTCAAGCCATCTTCATTATCTGCTTCCCCTTCTCTTCAAGTCCCAAGGCCTAATGGTGCTGGTGATGAGAGTTCTCTAATATGCAAAGATCCTGATCCTCAAACCAAAGAAATTTTCCTGCCATATCGGGTCTTTTGTACACGGAAAGATATACAATGTAAGGACGTTATTCTCGAAGCCGTGGATGTATCGAAAGCTTTAATCGAATATGCTTCACATACAGCAATCGAGCATTTGGTTCTTGGAATGTCAAACAAAACTGGTCTTCTTCGAAGATTCAAGACAGCAGATATTCCAGGAGCTGTAGCAAAAGGGGCACCAGATTTTTGTAATGTGTATGCTGTGACTAAAGCAAAGATTCATTCAATGAGATCAGCTAGTCGTCCTGCTCCTGCCATTTCTCCTCTACGCAACCAGCTTATTCAACCAAGCATCAAGGATGATCATTCATCAGACCCTGGACCAGGACCAGGAGTACCTCCAACTAATATCAATAATAATAATATGAGAGGACGTGATAGGCGAAACCTTGATGGACCATATAATAAAGCGCAGGATGAACTAGAACCTTTTAAGTCACCATTTACTAGGAGAGGTTTGAATGGAAAGTCATATGGCGAAATCTCAATGCCAGATAATGACATATCCTTTGTGAGCTCTGGAGTTGGAAGGCCAAGTACAGATCGAATGTTCCCTTCATTATTTGACACCTCAGATTCTGGATTCTCAAATCCACGTCTATCTTATAGCGCAGATCCAGATCTTGGTGTTGAGACATCCTCGCAGTATGGGAGAAGGTCTGTGGATTTGGTCAGCCCTCCTCCTGAATTCTCATCAAACTCTATGGATAGTGACGGACTTTCTTCTTCATCAGGCATGGATGATGTGGAAGCTGAAATGAGGAGATTGAAGATGGAGCTCAAGCAAACAATGGAAATGTACAGCACAGCTTGTAAAGAAGCTCTCTCAGCAAAGCAGAAGGCAGTTGAACTTCAGAGATGGAAGTTAGAGGAAGAGCGAAGATTAGAAGAGGCGAGGCTAGCAGAGGAAGCTGCATTGGCAATTGCAGAGAAGGAGAAGGCAAAATCCAAAGCAGCTCTTGAAGCAGCTGAGGCACAAAAGAGAATAGCAGAACTCGAAGCACAAAAAAGATTAAGTGCAGAAATGAAAGCACTCAGAGAATCAGAAGAAAAGAAGAATGCAATAGATGCTTTAGTAAATATAGATGTCAGGTATAGAAAGTATTCCATTGAGGACATTGAAGCTGCAACCCAGTTCTTCCATGAGTCAAAGAAAATTGGAGAAGGTGGTTATGGTCCTGTCTACCATTGTTTTCTGGACCATACACCTGTTGCAGTTAAGGTTCTACGTCCTGATGCAGCTCAAGGAAGATCACAATTTCAAAGAGAGGTTGAGGTACTGAGTTGCATAAGGCATCCCAACATGGTTCTCCTCCTAGGAGCCTGCCCAGAATATGGATGTCTTGTATATGAATTCATGGCTAATGGAAGCTTGGACGACTGCCTTTCTCGCCGAGGAAACACTCCCCCTCTTCCTTGGCAGCTAAGGTTCAAAGTTGCAGCTGAAATAGGCACTGGCTTATTGTTCCTTCACCAGACAAAACCAGAGCCTCTGGTTCACAGGGACTTGAAGCCAGCTAACATCTTACTCGACAGAAACTTCGTAGCCAAGATCAGTGACGTAGGTTTGGCCAGGCTAGTCCCACCAACTGTAGCAGACACTGTCACACAATACCGTATGACATCCACAGCTGGAACATTTTGTTACATAGACCCAGAATATCAGCAAACAGGAATGTTGGGAGTGAAATCAGACATATATTCCCTAGGAATAATCTTCTTGCAGATATTAACAGCAAGACCACCAATGGGTTTGACTCATCATGTTGAAAGAGCCATAGAAAAAGGAACATTCAAGGAGATGTTGGATCCAACGGTGCCTGATTGGCCAGAAGAAGATGCCTTGAGCCTGGCAAATTTGGCCCTCAAGTGTGCAGAGTTAAGGAGAAGGGACAGGCCTGATCTGGGAAAAGTCATATTACCAGAACTAAACAGATTGAGAATGCTTGCTGAAAGCAATGATCACCATTCAGTTCTGAATGGCTATTTAAGCCCTCCCAATATGAGCCTAGTTTCAGCCCCAGTGGTGCACAGTCAAATTCGTTCCACGGCTCACTCTGGGGAGAGCACAAGAAATAGATCAAGTCCTGCTTGA	2391	0.4404	MWLPKHQPEKKDGVQGIVAVAIDRDKGSQNALKWAIDHLLVRGSTVVLIHVKVKPSSLSASPSLQVPRPNGAGDESSLICKDPDPQTKEIFLPYRVFCTRKDIQCKDVILEAVDVSKALIEYASHTAIEHLVLGMSNKTGLLRRFKTADIPGAVAKGAPDFCNVYAVTKAKIHSMRSASRPAPAISPLRNQLIQPSIKDDHSSDPGPGPGVPPTNINNNNMRGRDRRNLDGPYNKAQDELEPFKSPFTRRGLNGKSYGEISMPDNDISFVSSGVGRPSTDRMFPSLFDTSDSGFSNPRLSYSADPDLGVETSSQYGRRSVDLVSPPPEFSSNSMDSDGLSSSSGMDDVEAEMRRLKMELKQTMEMYSTACKEALSAKQKAVELQRWKLEEERRLEEARLAEEAALAIAEKEKAKSKAALEAAEAQKRIAELEAQKRLSAEMKALRESEEKKNAIDALVNIDVRYRKYSIEDIEAATQFFHESKKIGEGGYGPVYHCFLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEFMANGSLDDCLSRRGNTPPLPWQLRFKVAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNFVAKISDVGLARLVPPTVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTARPPMGLTHHVERAIEKGTFKEMLDPTVPDWPEEDALSLANLALKCAELRRRDRPDLGKVILPELNRLRMLAESNDHHSVLNGYLSPPNMSLVSAPVVHSQIRSTAHSGESTRNRSSPA	796

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr3g00642	796	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	597	609	IPR008271	GO:0004672\|GO:0006468
	Accr3g00642	796	Gene3D	Phosphorylase Kinase; domain 1	458	551	-	-
	Accr3g00642	796	MobiDBLite	consensus disorder prediction	311	343	-	-
	Accr3g00642	796	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	452	551	-	-
	Accr3g00642	796	MobiDBLite	consensus disorder prediction	311	344	-	-
	Accr3g00642	796	Coils	Coil	371	441	-	-
	Accr3g00642	796	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	18	145	-	-
	Accr3g00642	796	FunFam	U-box domain-containing protein 51	552	752	-	-
	Accr3g00642	796	Coils	Coil	345	365	-	-
	Accr3g00642	796	Gene3D	Transferase(Phosphotransferase) domain 1	552	759	-	-
	Accr3g00642	796	SMART	serkin_6	479	748	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr3g00642	796	Gene3D	HUPs	17	166	IPR014729	-
	Accr3g00642	796	PANTHER	OS02G0152300 PROTEIN	18	783	-	-
	Accr3g00642	796	ProSiteProfiles	Protein kinase domain profile.	479	758	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr3g00642	796	MobiDBLite	consensus disorder prediction	196	265	-	-
	Accr3g00642	796	Pfam	Universal stress protein family	18	145	IPR006016	-
	Accr3g00642	796	Pfam	Protein kinase domain	479	733	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr3g00642	796	CDD	STK_N	17	169	-	-
	Accr3g00642	796	SUPERFAMILY	Protein kinase-like (PK-like)	462	737	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr3g00642	Accr-Chr3	7177579	7181887	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr3g00642	1	773	Receptor kinase-like Gene Family	AT1G78940	55.852	0.0	779

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Accr3g00642		Pkinase	5.8e-41	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr3g00642	-		-	qsa:O6P43_019335	1087.79