Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00623 ATGGAAGGAAGTGGAGGAGGGACGTCAAAGGAGGAAACCCTACCTCCTGGCTTTCGATTTCATCCCACAGATGAAGAACTCATCACCAGCTATCTCATCAACAAGATCTCTGATTCTGCGTTCTCCGCTCGAGCTATCACCGACGTAGATCTCAACAAATGCGAGCCATGGGAGCTCCCTGGGAAGGCGAAGATGGGAGAGAAAGAGTGGTACTTTTTCAGTCTGAGGGATAGGAAATACCCGACGGGGGTGAGAACGAACAGGGCGACAAACACAGGCTACTGGAAGACCACCGGGAAAGACAAGGAAATCCTCAACAGTGCAACATCGGAGTTGGTTGGCATGAAAAAGACTTTGGTTTTCTACAAAGGCAGAGCTCCAAGAGGTGAAAAATCCAACTGGGTCATGCACGAATACCGTATCCACTCCAAATCCTCCTTCCGACTACACAAGGATGAATGGGTGGTATGCAGAGTGTTCCAGAAGAGTGGAGGAGCCAAAAAGTACCCATCGAATAACACAAGAGGGGTGAATCCATATAGCCTGGAAATAGGTCCTAACATGGTGGCACCTTCAATGATGCATCATGTGGCGGATCCAAATTCTGCTCACTTCCTCTACGGAAGGAACTTTGTCAACACTGCTTCTGACCTTGCAGAGGTTGCTAGGGTTTTGAGAGCCGGAGGGGCTGCCTCCACCACCGCTGCTTTCAATTTACCAATGCAAACCCATGCTCCGCTAAACTATCCCGCCACAGCCCCCGGAGGATTTACCATTTCCGGCCTCAACTTGAATCTCGCCGGAGGAGGAGCAGCGGCAACTTCCGGGCAACCTGTTTACAGGCAGATGAACCCTCATGATGTGGGCCCCAACATGATGACAGCTGGCAGTTCTCTGAATGTATCAGATAGTGTAGGGTATGGTGCTACAGAAATGAGCAACCCTAATAATAATATTGGTCCGAGCAACAGGTTCATTGGGATGGACCATTGTGTGGATTTAGATAACTACTGGCCTTCCTACTAA 1026 0.4961 MEGSGGGTSKEETLPPGFRFHPTDEELITSYLINKISDSAFSARAITDVDLNKCEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEILNSATSELVGMKKTLVFYKGRAPRGEKSNWVMHEYRIHSKSSFRLHKDEWVVCRVFQKSGGAKKYPSNNTRGVNPYSLEIGPNMVAPSMMHHVADPNSAHFLYGRNFVNTASDLAEVARVLRAGGAASTTAAFNLPMQTHAPLNYPATAPGGFTISGLNLNLAGGGAAATSGQPVYRQMNPHDVGPNMMTAGSSLNVSDSVGYGATEMSNPNNNIGPSNRFIGMDHCVDLDNYWPSY 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00623 341 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 11 190 - -
Accr3g00623 341 FunFam NAC domain-containing protein 100-like 23 166 - -
Accr3g00623 341 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
Accr3g00623 341 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
Accr3g00623 341 Gene3D NAC domain 23 165 IPR036093 GO:0003677|GO:0006355
Accr3g00623 341 SUPERFAMILY NAC domain 12 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00623 Accr-Chr3 6994684 6996406 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00623 10 341 NAC Transcription Factor Family AT2G24430 50.992 2.57e-104 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr3g00623 NAM 2.3e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00623 - - lja:Lj1g3v2035130.1 459.914