Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00593 ATGGAAGGTGGCAGGACAACGCCTGCTTCATCTGACGGGCTCGGTGATTGTGCCCAGAAAATAAGAGCACTGCATGGGCGGACTACTGGCCCTACAAGGCGTTCTACTAAAGGACAGTGGACGCCTGAAGAGGATGAGATTTTGCGGACGGCTGTTCAGCGTTTCAAAGGGAAGAACTGGAAAAAAATAGCGGAGTGCTTTAAGGATAGAACAGATGTACAATGCCTACATAGGTGGCAAAAAGTCTTAAATCCTGAGCTGGTCAAAGGTCCATGGTCGAAAGAGGAAGATGAAATAATAATTGATTTAGTGAATAAATATGGGCCAAAAAAGTGGTCGACCATCTCACAGCACCTACCTGGACGCATCGGTAAACAATGTCGAGAAAGGTGGCATAATCATCTTAATCCTTCTATAAACAAGGAAGCGTGGACCTATGAAGAGGAGCTGGCTCTAGTACGTGCTCATCAGATTTATGGGAACAGATGGGCAGAATTGACAAAGTTCTTGCCTGGAAGGACGGACAATTCTATAAAAAATCACTGGAACAGTTCAGTAAAAAAGAAATTGGATTCCTACTTGGCATCAGGTTTGCTTACTCAATTCCAAGATGTACCCTTTGTTGGACATCCAAATCAACCTGGGGTTTCTACCTCTTCGAGGCGGCAGTGTAGTGGAGATGATAATGGTTATAAGTGCACTGAAGGAGAGGAAGTTTCTGAGTGTAGCCAGGAGTCAGCTAATGTTAGTTGCTTCCCATCTGCTAGAGATATGACCGATGTTGTATTAAACACTTTAGAGGAACTAAGGCCAAATGAAGATATCAGTGTGGGAAAGGAGCACAGTTCTAGTCAAGCATCTTGTCTAGAGCCATATTGCATATCTCTGGATGACGTTGCAATATCCATTCCGGATGTTGCTCATGAAGATCCTTCTTGTTCTGATTTCATTGAGCAAACATACTCACATGATCCTGGAAATTCTGCAAGCAGGGATACTCAGTTTACCTTTCACGCCGTCCCTAACATTTGTTCATCAGACTTGGATGAAGATTGTTCACTTCTGCGAAGGGACAGTGCAGATTGCGTTGAAAGCCATGGCATTGTAAGTGTTCCATTGCATACTTCAGTGGGATCAGGTATTTCAACATGCATGGGACCCCCATCTATAGATCCTGCGAAACAAGACCACATGTTAATATCTAGTGAAGAATGTTATAGGGTCCTATATTCAGAGGCAATAAATGATGGATGCTTTTCTTCAGGTGATTATAACAAAAATGTTAATCCAGTTTCGTCCGGATGCATTTCATTATTTGGTCAATCATCTGACTTCCATATACCTGAGACCGGCGGAACCTCAACTTCATTCCAAACTTTTCCTGTAAAATCTAATGATTTAATAGGATCTTCATGCTCTCAATCTCCAGTCCTTTTTGATAGTGACGGTAGATTAGTGTATACAGCTGAAGCCAATTATCTATTTGGAGCTGATGATCTGCAATTTGTCTCCAGAGCTCAGGATAACTTTATTTATGCTAACAACTCATCCGTTGCTCCTTGCATGGATGCTATAGATAGTGGAGAAATGCACGAGGAACAAGATAATGTGAAGGATGCTTCAAAATTGGTGCCTGTAAATACATTTGGCTGCGCATCAGATGCCAAGCCTACTTGTTGTCCAGTGGAAGAAAGGACAGATGGGTATATAGAACAGTTAGAGACCGGAGCTCTATGTTATGAACCGCCTCGATTCCCAATTTTGGATATTCCCTTCTTGAGCTGTGATCTTATCCAATCAGGAGGGGATATGCAACAAGAATTTAGTCCACTGGGTATCCGCCGGCTTATGATGTCATCTATGAACTGCCCAACTCCCCTGAGGCTGTGGGATTCACCTTCTCGTGATAATAGCCCAGATGCTTTGTTGAAAAGTGCTGCTAAAAGTTTCACTGGTACACCATCCATATTGAAGAAACGACATCGAGACTTGTTGTCGCCTCTATCAGACAAGAGAGCTGACAAGAAACTGGAAACTGACTTGACGTCCACGTTGGCTACTCATTTTTCACGTTTGGAAGTCATGTTTGATGATAATGAGACTCGGGAAGTAGGTATACTTTCTCAACCTTTAATGGATAAAGACAAATCAGGAGCAACTGTTGAGGATACCAAAAATTGTGGACAATCTTTGAAAGGAGAATATGAAGAGGGAAGAAATGAATGTACACTTGGTAACAAAAAGTCAGAAAGAGAGACAGCTGATGGCGATCCTCAGGATTTCCAACGACCTCATAATGATTCGGAGATGAAGGTTGATATCGATGTTGATAAAGCTGCTGAGATTGTGCAACAACCTTCTGGAGTCTTAACTGAGCATGATATGAATGACTTGCTATTATATTCTCCTAATCAAATGTGTTTTAAACCAGACAGAACTCACTGTTCAAGTGCTAAAACTCCAAAAAATTTGAACAACAGAAATTTGGAAGCAGCTTTAGATAAGAGTATTTCTTCAAATCCATGCTCAAGTGATGGCTTCCCTTCTGTTCGTGTAAAAAATCATGACGTTTCTTCATTTCCAGTTACTTGTGTATCATCTCTTTGTTCATCAGCACCTCCCGAGAATATTGGTGATCATCCCGGAAATGATGCTGGTTTTGACGCATTTAGCATATTTGGCGGAACACCTTTTAGAAGAAGCATTGAATCGCCTTCAGCATGGAAGTCTCCCTGGTTCATGAACACTTTCTTGTCTAGCCCCAGACTTGATACTGAAATAACAATCGAGGATTTTGGGTATTTCATGAGCCCAGGCGATAGGAGCTATGATGCGATTGGGTTGATGAAACAGGTGAAGGAACAAACTGCGGCTGCGTATGCTAATGCTCAGGAGATTTTGGACAGTGTAACTCCCAAAGCAAAAGATTCATCTGAAAATGTCAGGGACACAGACCAGGAAAAGGATAATCTTGATCGTCCCGTGAATGCTTTGGTAGAGCGACGCACACTTGATTTCAGTGAGTGTAAAACACCAGGGAAGGAGGGCAACGGCAAAGGCTCTGCTCAGACCTTCTCAAGCCCTTCCTCATATTTGTTGAAGGGATGTAGATAG 3114 0.4239 MEGGRTTPASSDGLGDCAQKIRALHGRTTGPTRRSTKGQWTPEEDEILRTAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDLVNKYGPKKWSTISQHLPGRIGKQCRERWHNHLNPSINKEAWTYEEELALVRAHQIYGNRWAELTKFLPGRTDNSIKNHWNSSVKKKLDSYLASGLLTQFQDVPFVGHPNQPGVSTSSRRQCSGDDNGYKCTEGEEVSECSQESANVSCFPSARDMTDVVLNTLEELRPNEDISVGKEHSSSQASCLEPYCISLDDVAISIPDVAHEDPSCSDFIEQTYSHDPGNSASRDTQFTFHAVPNICSSDLDEDCSLLRRDSADCVESHGIVSVPLHTSVGSGISTCMGPPSIDPAKQDHMLISSEECYRVLYSEAINDGCFSSGDYNKNVNPVSSGCISLFGQSSDFHIPETGGTSTSFQTFPVKSNDLIGSSCSQSPVLFDSDGRLVYTAEANYLFGADDLQFVSRAQDNFIYANNSSVAPCMDAIDSGEMHEEQDNVKDASKLVPVNTFGCASDAKPTCCPVEERTDGYIEQLETGALCYEPPRFPILDIPFLSCDLIQSGGDMQQEFSPLGIRRLMMSSMNCPTPLRLWDSPSRDNSPDALLKSAAKSFTGTPSILKKRHRDLLSPLSDKRADKKLETDLTSTLATHFSRLEVMFDDNETREVGILSQPLMDKDKSGATVEDTKNCGQSLKGEYEEGRNECTLGNKKSERETADGDPQDFQRPHNDSEMKVDIDVDKAAEIVQQPSGVLTEHDMNDLLLYSPNQMCFKPDRTHCSSAKTPKNLNNRNLEAALDKSISSNPCSSDGFPSVRVKNHDVSSFPVTCVSSLCSSAPPENIGDHPGNDAGFDAFSIFGGTPFRRSIESPSAWKSPWFMNTFLSSPRLDTEITIEDFGYFMSPGDRSYDAIGLMKQVKEQTAAAYANAQEILDSVTPKAKDSSENVRDTDQEKDNLDRPVNALVERRTLDFSECKTPGKEGNGKGSAQTFSSPSSYLLKGCR 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00593 1037 CDD SANT 91 135 IPR001005 -
Accr3g00593 1037 Gene3D - 36 88 - -
Accr3g00593 1037 MobiDBLite consensus disorder prediction 975 1009 - -
Accr3g00593 1037 SMART sant 36 85 IPR001005 -
Accr3g00593 1037 SMART sant 88 137 IPR001005 -
Accr3g00593 1037 SMART sant 140 188 IPR001005 -
Accr3g00593 1037 FunFam Transcriptional activator Myb isoform A 89 141 - -
Accr3g00593 1037 SUPERFAMILY Homeodomain-like 38 93 IPR009057 -
Accr3g00593 1037 SUPERFAMILY Homeodomain-like 86 182 IPR009057 -
Accr3g00593 1037 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 190 IPR017930 -
Accr3g00593 1037 CDD SANT 40 83 IPR001005 -
Accr3g00593 1037 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 139 IPR017930 -
Accr3g00593 1037 Pfam Myb-like DNA-binding domain 141 183 IPR001005 -
Accr3g00593 1037 Pfam Myb-like DNA-binding domain 37 83 IPR001005 -
Accr3g00593 1037 Pfam Myb-like DNA-binding domain 89 135 IPR001005 -
Accr3g00593 1037 MobiDBLite consensus disorder prediction 1017 1031 - -
Accr3g00593 1037 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 83 IPR017930 -
Accr3g00593 1037 ProSiteProfiles Myb-like domain profile. 84 135 IPR001005 -
Accr3g00593 1037 PANTHER MYB PROTEIN-RELATED 37 110 - -
Accr3g00593 1037 MobiDBLite consensus disorder prediction 731 767 - -
Accr3g00593 1037 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
Accr3g00593 1037 Gene3D - 89 140 - -
Accr3g00593 1037 FunFam Transcriptional activator Myb isoform A 36 88 - -
Accr3g00593 1037 MobiDBLite consensus disorder prediction 970 1037 - -
Accr3g00593 1037 FunFam Transcription factor MYB3R-2 142 204 - -
Accr3g00593 1037 CDD SANT 143 183 IPR001005 -
Accr3g00593 1037 Gene3D - 142 201 - -
Accr3g00593 1037 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00593 Accr-Chr3 6729690 6734626 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00593 21 1037 MYB Transcription Factor Family AT4G32730 44.947 0.0 733
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr3g00593 Myb_DNA-binding 1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00593 - K09420 gmx:100811335 1262.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00593 3 6729690 6734626 Accr3g00593 3 6729690 6734626 ECH