Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00592 ATGGAAGGTGACAAGACAACCCCAGCTCCACCAGATGGGCTCAGTGACGGTGTTCAGAAAATTAGAGCCTTGCATGGGCGAACTAGTGGCCCTACCAGGCGTTCTACAAAAGGACAGTGGACTACAGAAGAGGACGAGATCTTGCAGAAGGCAGTTCAACGTTTTAAAGGAAAGAATTGGAAGAAAATAGCGGAGTGTTTCAAGGATAGAACAGATGTACAGTGTCTACACAGGTGGCAGAAAGTCTTAAACCCTGAGCTGGTCAAAGGTCCATGGTCTAAAGAGGAAGATGAAATAATAATTGATTTGGTGAACAAATATGGGCCAAAAAAATGGTCTACTATTGCACAGCACTTACCTGGACGAATTGGTAAGCAATGCCGAGAAAGGTGGCATAATCATCTCAATCCCGGTATAAACAAAGAAGCATGGACCCAAGAGGAAGAGTTGGCTCTAATACGTGCACATCAAATTTACGGGAACAGATGGGCCGAATTGACGAAGTTCTTGCCTGGAAGGACGGACAATGCTATAAAAAATCACTGGAACAGTTCTGTCAAAAAGAAATTGGATTCTTACTTGGCGTCGGGTTTGCTTATACCCCATGTTGGACATCCAAATCAACCCGTGGTTTCTACATCTTCGAGGTTACTTTGCAGTGGAGATGATAGTGGTCAAAAGGGAATCGGAGAGGAAGTTTCAGAGTGTAGCCAAGAGTCTGCTAGTGCTGGTCGTCTACCAGTTTCCCAGGGAATGACAAGGGCTGTTTTACATGCTAGAGAAGAAACCAAGCCAAATGAATATTCTAGTCTAGGAAAGGAGCAAAGTCCAAGTCAAGCATCATGCTCAGAGCCATATTATATACCACTGGATGAGGTTACCATATCCAATTCAGACATTGCTCGTGAAGAGGCTTCCTCTTCTCGATTCATTGAGCAAAAATACTCCCAAGAACCTGGAAATTTTGCAGGCATGGATAATGGATTCCAATTACATGGTTTACCCAGTATTTCTTCATTAGACTTGGGTCAGGAATTCTCACTTTTGCAAGGAGATTGTATAGTTTCTGACGAAAACCATGACATTGTGAATGCTCAATTTCATACTTCAGCGGGGTTAGGTATTGCAACATCTATGGCTCCCACATCTATGGATTCTTCTAAACCAGAGGACATGTTGATGGCTGATGAAGAATGTTGTAGATTTCTATTTTCAGATGCAATGAATGATGGAACCTTTTCAACTGGAGATCACAACAAAGATGTTGATATGGTTTTGCCTGCACGCACTTCAAATCTTTTCCAATCATCTGAGATCCAGATATCGGATGCTGATAGAACCTCAGCTGCACTCAAAACTTGTCCAACAAGATCTAATAATTTAATGGAACCTTCATGCTGCCAATCTTTCCCAATTGTTCCTTCATCGGTTTTAGTTAATGATGGTAGAGTACTGTACACTGCTGAAGCCGCCCGAATGTATGGAGGTGATAATCAGCTCTCTGCCTCCAACGCACATGACAGCTTCATTCACCCCAACGACTCATCCATCTCACCTTGCATTGATATTATAGATAGTGCTGAAATGCACAATGGAACCAATATTGTGAATGATGCTTTAAGACTGGTCCCTGTAAATAATTTTACAAATGCATCCGATGCCAAGCAAACTAGTAATCCAGTGGATGAAAAGGCAGACGTACAAACAGAACAGGAGGACACAGGATCTCTATGTTATGAACCTCCTCGATTTCCAAGCTTGGATATTCCTTTCTTTAGCTGTGATCTTATACAAAATGGAGGGGATATGCAGCAAGATTTCAGTCCTCTCGGCATCCGTCGGCTTATGATGTCTTCAGTGAACAGTCCAACTCCCTTGAGGTTGTGGGACTCGCCTTCTCGTGATGATAGCCCAGATGCTTTGTTGAGAAGTGCTGCAAAAACTTTCACTAGTACGCCATCCATTTTAAAGAAGCGACGCCGGGACTTGTTATCACCATTATCAGATAAGAGAATTGAGAAGAAACTTGAGACTGACATGACATTCACATTGACTACACATTTTTCACGTTTGGATGTCATGTTTGATGACAATGAAACTCAGGCCGCGAATGTGCTTCCTCCATCCTCATTACAGAAAATTAATAATGGAGCCTCAGATGATGATAAAGAAAATTGTGAGCCAGCTTTCAAAGTAGAACATGTAGAGAGAAAAGAGGAATCTGCCATTTTGAGGTGCAAAGAGTCAAAAAAAGATACTGTTAATAACTCTCTGGACGTTGATTCAAAGATGGAGACTGATGTTGACGCTGATCCTGCTACTGAGATTGGGCAACAACCTTCCGGAGTCTTAATCGAACGTGATATGAATGACTTGCTATTGTATTCTCCAAATCAAATTCGTTTTAGCTTGGATAGAACTCACATTTCACGTGCTAGAACTCCCAAAAACCTGGACAATAGAAGCTTGGAAGCAGCCCCACATCAGAACATCGCTCAAAAGTCATTTCCTGGAAATCCTTGCACAAGTGATTGCTCCCCTTCTATTTGTGTAAAGGAGCATGACATTTCTTCAGTTCGGCCATCTCATTGTTCATCTGCCCCTGGGGAGAATTCTGGTGATCATCCAGGGAATGATGCTGGTTTTGAAACATTCAACATATTTGGGGGAACACCTTTTAGAAGAAGCATTGAATCACCTTCAGCATGGAAGTCCCCTTGGTTCATTTACACTTTTCTGACTAGCCCCAGGATTGATACTGAAATAACTGTTGAGGATTTTGGGTATTTAATGAGCCCCGGTGATAGAAGCTATGATGCAATTGGGTGGATGAAGCAGGTCAAGGAACAAACTGCAGCCGCATATGCCAATGCTGAGGAGATTTTGGAAATTGACACTCCTAAAGCAAAAGATGCATCTGGAAATGCCGGGGATGGGGACCAGGAAAGAAGAGACCCTAATAATCAGCCTGGCAATCAATGTCAGTTAGCTTCTTCAAATGCTTTGATGGAGCGACGGGTACTTGACTTTAGTGAATGTGGAGCACCAGGAAAGGAGAACAGCAAATCTTCAGCCATGACCTTCTCAAGCCCCTCTTCATATTTGTTGAAAGGGTGTAGATAG 3123 0.4265 MEGDKTTPAPPDGLSDGVQKIRALHGRTSGPTRRSTKGQWTTEEDEILQKAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDLVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPGINKEAWTQEEELALIRAHQIYGNRWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYLASGLLIPHVGHPNQPVVSTSSRLLCSGDDSGQKGIGEEVSECSQESASAGRLPVSQGMTRAVLHAREETKPNEYSSLGKEQSPSQASCSEPYYIPLDEVTISNSDIAREEASSSRFIEQKYSQEPGNFAGMDNGFQLHGLPSISSLDLGQEFSLLQGDCIVSDENHDIVNAQFHTSAGLGIATSMAPTSMDSSKPEDMLMADEECCRFLFSDAMNDGTFSTGDHNKDVDMVLPARTSNLFQSSEIQISDADRTSAALKTCPTRSNNLMEPSCCQSFPIVPSSVLVNDGRVLYTAEAARMYGGDNQLSASNAHDSFIHPNDSSISPCIDIIDSAEMHNGTNIVNDALRLVPVNNFTNASDAKQTSNPVDEKADVQTEQEDTGSLCYEPPRFPSLDIPFFSCDLIQNGGDMQQDFSPLGIRRLMMSSVNSPTPLRLWDSPSRDDSPDALLRSAAKTFTSTPSILKKRRRDLLSPLSDKRIEKKLETDMTFTLTTHFSRLDVMFDDNETQAANVLPPSSLQKINNGASDDDKENCEPAFKVEHVERKEESAILRCKESKKDTVNNSLDVDSKMETDVDADPATEIGQQPSGVLIERDMNDLLLYSPNQIRFSLDRTHISRARTPKNLDNRSLEAAPHQNIAQKSFPGNPCTSDCSPSICVKEHDISSVRPSHCSSAPGENSGDHPGNDAGFETFNIFGGTPFRRSIESPSAWKSPWFIYTFLTSPRIDTEITVEDFGYLMSPGDRSYDAIGWMKQVKEQTAAAYANAEEILEIDTPKAKDASGNAGDGDQERRDPNNQPGNQCQLASSNALMERRVLDFSECGAPGKENSKSSAMTFSSPSSYLLKGCR 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00592 1040 CDD SANT 91 135 IPR001005 -
Accr3g00592 1040 SMART sant 140 188 IPR001005 -
Accr3g00592 1040 SMART sant 88 137 IPR001005 -
Accr3g00592 1040 SMART sant 36 85 IPR001005 -
Accr3g00592 1040 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 139 IPR017930 -
Accr3g00592 1040 MobiDBLite consensus disorder prediction 262 281 - -
Accr3g00592 1040 FunFam Transcription factor MYB3R-2 142 207 - -
Accr3g00592 1040 PANTHER MYB PROTEIN-RELATED 37 122 - -
Accr3g00592 1040 FunFam Transcriptional activator Myb isoform A 36 88 - -
Accr3g00592 1040 MobiDBLite consensus disorder prediction 1013 1040 - -
Accr3g00592 1040 ProSiteProfiles Myb-like domain profile. 84 135 IPR001005 -
Accr3g00592 1040 FunFam Transcriptional activator Myb isoform A 89 141 - -
Accr3g00592 1040 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
Accr3g00592 1040 Gene3D - 89 140 - -
Accr3g00592 1040 CDD SANT 40 83 IPR001005 -
Accr3g00592 1040 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 190 IPR017930 -
Accr3g00592 1040 Pfam Myb-like DNA-binding domain 37 83 IPR001005 -
Accr3g00592 1040 Pfam Myb-like DNA-binding domain 141 183 IPR001005 -
Accr3g00592 1040 Pfam Myb-like DNA-binding domain 89 135 IPR001005 -
Accr3g00592 1040 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
Accr3g00592 1040 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 83 IPR017930 -
Accr3g00592 1040 MobiDBLite consensus disorder prediction 966 998 - -
Accr3g00592 1040 SUPERFAMILY Homeodomain-like 86 182 IPR009057 -
Accr3g00592 1040 MobiDBLite consensus disorder prediction 23 42 - -
Accr3g00592 1040 MobiDBLite consensus disorder prediction 1017 1034 - -
Accr3g00592 1040 CDD SANT 143 183 IPR001005 -
Accr3g00592 1040 Gene3D - 36 88 - -
Accr3g00592 1040 SUPERFAMILY Homeodomain-like 33 89 IPR009057 -
Accr3g00592 1040 Gene3D - 142 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00592 Accr-Chr3 6718474 6723843 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00592 21 1040 MYB Transcription Factor Family AT4G32730 43.225 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr3g00592 Myb_DNA-binding 2.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00592 - K09420 aprc:113848458 1268.45