Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00574 ATGGAGAGGATCATTGGAGGGAGGTTTAAGATGGGTCGGAAGATAGGTAGCGGATCCTTCGGCGAAATTTATATTGCTGCCGATATCCAGACATCTGAGATCGTAGCCGTGAAGATGGAGGACAAGAAGACTAAACACCCACAACTACTGTATGAGGCCAAGTTATATAACGCCCTTCAAGGAGGAAGTGGTATTCCAAGTATGAAATGGTATGGTATTGACGGAGACAATAACGTTATAGTCATGGATCTTTTGGGACCAAGTCTCGAGGATCTTTTTGTATACTGCAGGGGGAAGTTTTCATTAAAAACAGTTTTGATGCTGGCTGATCAGATGCTTGGAAGGATAGAGTATATACATTCTAAGGGATTTTTGCATAGAGACATCAAACCAGATAACTTCCTTATGGGTCTAGGGAGAAAAGCAAATCAGGTTTATATGATTGATTATGGACTTGCAAAAAGATACAAGGATCCTACAACCAATAAACATATTTCTTATAGAGAGAACAAAAATTTAACAGGCACTGCCCGATATGCGAGTTGCAATACTCATTTGGGAATTGAGCAAAGTAGACGGGATGATTTGGAGTCTCTTGGTTATCTTCTTCTTTACTTCTTAAGAGGAAGCCTTCCTTGGCAGGGTCTGAGAGCTGCCACTAAAAAGCAGAAATATGACAAGATCTGTGAGAAGAAGTTATCCACTTCAATCGAGATCCTTTGCAAGTCTTATCCTGCGGAGTTTGCTTCTTACTTACATTATTGCCACTCTTTGACGTTTGATCAACGCCCAGATTATGGATTCTTGAAGCGCCTTTTTCGTGATTTATTTACTCGTGAAGGATACGAGTCTGACTACATATATGATTGGACCATTCTTAAATATCAGCAATCACAACAGACAAAGATGAAGGATCAATCAACTCCTGCTGCTGATGTGCCTGACCGTGTAGAACCAAATTTGGTAGATAAGAATAAAGGTGTCAACGGTTCTGCTCAAATTGCAGAGGCAAGACCATTAACAAATGTTAATGCACGTGTTAATATGCAGATCAGGTTATCACATGACGATCATAATTCGAATGCAGAGAATCAGATTGTGAAACGACCCGTGAGAATTGGTCCGTCTACATCCGTGAAACCCGGAATTGCAGAAAATGTGCCAAAAGCAGAGAAACCAATAGGAAGCTCAAACCCGGTACGTGTATTTGGGCATAACACTGCCACTTCAAGCAGCTGGGTTCCTTCACTACGCAGAATTTCTTCAGCCAAAAAATAG 1278 0.41 MERIIGGRFKMGRKIGSGSFGEIYIAADIQTSEIVAVKMEDKKTKHPQLLYEAKLYNALQGGSGIPSMKWYGIDGDNNVIVMDLLGPSLEDLFVYCRGKFSLKTVLMLADQMLGRIEYIHSKGFLHRDIKPDNFLMGLGRKANQVYMIDYGLAKRYKDPTTNKHISYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYLLLYFLRGSLPWQGLRAATKKQKYDKICEKKLSTSIEILCKSYPAEFASYLHYCHSLTFDQRPDYGFLKRLFRDLFTREGYESDYIYDWTILKYQQSQQTKMKDQSTPAADVPDRVEPNLVDKNKGVNGSAQIAEARPLTNVNARVNMQIRLSHDDHNSNAENQIVKRPVRIGPSTSVKPGIAENVPKAEKPIGSSNPVRVFGHNTATSSSWVPSLRRISSAKK 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00574 425 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Accr3g00574 425 Gene3D Transferase(Phosphotransferase) domain 1 1 337 - -
Accr3g00574 425 PANTHER CASEIN KINASE-RELATED 13 322 - -
Accr3g00574 425 FunFam Casein kinase I isoform delta-like 1 339 - -
Accr3g00574 425 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00574 425 MobiDBLite consensus disorder prediction 400 425 - -
Accr3g00574 425 MobiDBLite consensus disorder prediction 373 425 - -
Accr3g00574 425 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00574 425 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00574 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Accr3g00574 425 MobiDBLite consensus disorder prediction 304 326 - -
Accr3g00574 425 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00574 Accr-Chr3 6502600 6507725 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00574 8 213 EF-hand Containing Proteins AT2G17890 28.837 2.38e-14 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Accr3g00574 Pkinase 5.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00574 K08960 - qsa:O6P43_015510 615.92