Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00570 ATGCCGAAGATAGCTCTGGGGACCTCTCGGGAGGCCACCCAGCCCGACTGCCTTCAGGCCCTCGTCATTGAGTTCGTCACCACCTTCCTCTTCGTCTTCGCCGGTGTTGGTTCCGCCATGGCGACCGAAAAGCTAGGAGCAGACGCACTGGTAGGGCTGTTTGCCGTGGCGGTGGCACACGCACTTGTGGTGGCCACCATGATATCGGCCGGCCATATTTCCGGCGGCCACCTCAACCCGGCCGTCACGCTCGGCCTCCTCGTCGGCGGGCACATCACCCTCTTCCGTTCCATCCTTTATTGGATCGATCAATTGCTCGCATCGTCCCTTGCGTGTTACCTTCTGTACTACCTCTCCGGCGGACAGGCAACTCCGGTGCACACGCTGGCAAGTGGAGTGGGGTATGCTCAGGGAGTGATATGGGAGATCGTCCTCACGTTTTCATTGTTGTTCTCTGTGTACGCGACTATGGTGGATCCTAAGAAGGGAGCCATTAACGGGCTTGGGCCCACCCTTGTTGGGTTCATTGTGGGCGCCAACATCCTAGCAGGAGGGGCCTTCTCTGCTGCTTCCATGAACCCAGCGAGATCCTTTGGGCCAGCTTTGGTCAGTGGGAATTGGACCGATCACTGGGTGTACTGGGTCGGTCCACTCATTGGGGGTGGCTTTGCAGGCTTCATGTATGAGACCTTCTTCATCAACAGATCCCATGTCCCACTTCCTCAAGACGATCAAGAGAGTCATTAG 747 0.5756 MPKIALGTSREATQPDCLQALVIEFVTTFLFVFAGVGSAMATEKLGADALVGLFAVAVAHALVVATMISAGHISGGHLNPAVTLGLLVGGHITLFRSILYWIDQLLASSLACYLLYYLSGGQATPVHTLASGVGYAQGVIWEIVLTFSLLFSVYATMVDPKKGAINGLGPTLVGFIVGANILAGGAFSAASMNPARSFGPALVSGNWTDHWVYWVGPLIGGGFAGFMYETFFINRSHVPLPQDDQESH 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00570 248 FunFam Probable aquaporin TIP1-1 2 245 - -
Accr3g00570 248 SUPERFAMILY Aquaporin-like 11 242 IPR023271 -
Accr3g00570 248 PRINTS Major intrinsic protein family signature 96 115 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr3g00570 248 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr3g00570 248 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr3g00570 248 PRINTS Major intrinsic protein family signature 59 83 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr3g00570 248 PRINTS Major intrinsic protein family signature 211 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr3g00570 248 PRINTS Major intrinsic protein family signature 141 159 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr3g00570 248 PANTHER AQUAPORIN-8 4 237 IPR034294 -
Accr3g00570 248 Pfam Major intrinsic protein 12 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr3g00570 248 ProSitePatterns MIP family signature. 77 85 IPR022357 -
Accr3g00570 248 Gene3D Glycerol uptake facilitator protein. 2 244 IPR023271 -
Accr3g00570 248 CDD MIP 19 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00570 Accr-Chr3 6482499 6483433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00570 1 245 Major Intrinsic Protein MIP AT2G25810 77.143 4.60e-132 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00570 K09873 - gmx:100811447 407.912