Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00559 ATGTTCTTTGATGGATTCCGGTGCATGCTCCTCGTTCTTACGCAGCTTGGGATCCGAGGATTGATTCAGACGAAGAGATCAGAGTGGTGGACTCCATCCGTGGTGATAAACATGGCTCGAACTGAATCAAAGTGTTGCATCACGTTTTTGTTTGTCCTCATCATGTTGACGATGACGATGAACTATGTGGCGTCCCATGAAAAAGGAGAAGAGGAGCTTTTATTATCGTTCAAGGCTTCCATCAACGACCCACTTCACCATCTCTCAGACTGGGTCGTCACTTCCTCTTCCTCCAGTATCTGCCACTGGAATGGTGTCACCTGCAACACTAACTCCCATGTTCGCGCCATCAACCTCTCCGGCAAGAACATATCCTCCTATAATATTTCCTCCTCCGTATTTCAACTTCCACACGTCGAACACATTGACCTCTCCGACAATCTGCTCTCTGGGGGAATCTCTTTCTCTCTCTCTTCCCTTCTCTATCTCAATCTTAGCAATAACAACTTCACGGGTCCTGTCCCATCATCATTTTCCCGCATCCAAATTCTGGATCTTTCGAACAACATGTTTTCCGGGGAAATACCCCACCAAATTGGATCACTCACGAGTCTGAGGTATGTTGATCTGGGAGGCAACGTTTTGGTGGGAAAGATTCCTGATTCTGTCACTAACATGACAGGTTTAGAGTACTTGACCTTGGCTTCTAACCAGCTCGTGGGTGAAATCCCTCCAAAAATTGTCCTTATGAAGAGCTTAAAGTGGATTTATTTCGGGTACAATAATCTCTCGGGTGAGATTCCAGAAAGAATCGGAGAACTGAAGAATTTGAATCATCTTGATCTTGTTTACAACAACCTCACTGGACACATTCCCGATTCTCTTGGGAACCTCACTAATCTTGAGTATCTTTTTCTCTACCAAAACAAGCTGACAGGTCGAATTCCACGGTCAATATTTGAGCTTAGAAAGCTTGTTTCACTTGATCTTAGTGACAATTTTCTGTCTGGTGAGATTTCAGAGCTCGTAATTCGGCTTCAGAGACTTGAAATTCTCCACCTTTTCTCCAACAACTTTACCGGCAAGATTCCAAACGCTGTAACCTCTCTGCCTCGGCTCCAAGTTCTTCAGCTATGGTCTAACGGATTAACGGGTGAGATCCCAGAGGATTTAGGAAAGCACAGCAACCTCACGGTTCTGGATCTTTCCACCAACAAACTTTCTGGGAAAATTCCAGATAGTTTATGTCACTCTGGCGCTCTTTACAAGCTTATCCTTTTCTCGAACTCTCTTCAAGGGGAATTACCAAACAGCTTAACCTCTTGCACAAGCTTGCGCCGAGTTCGCCTTCAGAACAATAAGTTCTCCGGTGGACTACCGTCCCGACTAACTCAACTGCCACAGGTGTATTTATTGGATATCTCCGGTAATCAACTCTCTGGCAGGATTGATGATAGGAAGTGGAATATGTTGTCGCTTCAAATGTTGAATTTGGGTAACAACAATTTCTCCGGTGAGTTGCCAACCATTTTTGGTAGTACAAAATTGGAGAAACTGGACTTATCCGAAAATCGATTTTCTGGTAATATTCCACGTCGGCTTGGAAGCTTATCGGAGCTGATGCAATTGAATCTGAGCAATAACAAACTATATGGTGAAATCCCACAAGAGCTCACTTCCTGCAGGAAGCTAGTGCTTTTAGATGTCAGCCACAATCAACTCACTGGTCAAATTCCGACCAGTCTCGGTGACATGCCGGTTCTGAGCTTGCTGGATTTATCAGATAACCAATTTTGGGGTAAAATTCCAGAGAATTTAGGCAGAGTAGAATCTCTAGTGCAGCTAAACATATCCCACAACCATTTTCACGGACATTTACCGGCCACCGGAGCTTTCCTCGCCATTAATGCCAGCGCCGTCACTGGCAACGACCTATGTGGTGGTTCCGGTGGGTTGCCGCCATGCAAAAAAGGCGATAAGAATCCATGGTTTGTCGTACTCTGGTTCGCGGTGGGATTTGTAGGGTTTGCATTAGCAGCCTTTCTAGTTACTTGTTCGCGTAGAAGAAACAGCTTGGAGCTGAAGAGAGTGGAAAACGAAGACGGTACGTGGGAGATTCAATTTTTCGATTCCAAGTTTGCAAAATCGATCGCAATGGACGATATTTTATCGTCGGCAAAAGCAGGACATGTGATCGCCAAAGGGAAGAACTGGGTTTCATACGAAGGGAAGTGCATGGCAAGTGGCATGCAATTCGAGGTGAAGGAAATCAGAGACTTAAATTCAGTTCCGTTAAGTTTCTGGGAAGACTTGATGGAATTGGGTAAGCTCCGGCATCCGAATATTTTTAAACTGATGGGACTATGTCGTTCGGGAAAAGGAGCATTTTTGGTGTATGAGGATGCAGAAGGAAAGAGTTTAAGTCAAGTTGTGAAGAATTTGAGCTGGGAAAGTCGACGGAAAATCACCGTCGGCATTGCAAAAGCACTAAAGTTTCTGCATGCTCAATACTCATCAGTTATTTTGGTCGGTGACATGTCGTCGGAAAGCATTATCGTCGACGGCAATGACATTCCACGCTTGAAGTTGAGCCCTCCGGCATTGTTTAAGGGCTCCATTTCTTCTCCTTACGTTGCCCCAGAAGTGAGGAATGGGAAGGAGGTGACAGAGAAGAGCGACGTGTATGGATTTGGTGTGGTTCTGATAGAACTGTTGACGGGAAGGAGGGGAGTGGGAACGGAGGAGGAGGGGAGCATAGTGGAGTGGGCCCGATTCTGCTATTCGGACTGTCATTGGGAGACGTGGATCGACCCGACAATGAAAGGTGGAAAGCAGAACGACGTCGTAGAGGCCATGAACCTGGCACTGCACTGCACCGCCATGGATCCCACAGCAAGGCCATGCGCAAGCGTCGTCTTCAAAGCACTCTCTGCGGTCACCTGCACTCACTCTGTTCTCTCTGTCTCTGCACTCCAACCATGA 2982 0.4614 MFFDGFRCMLLVLTQLGIRGLIQTKRSEWWTPSVVINMARTESKCCITFLFVLIMLTMTMNYVASHEKGEEELLLSFKASINDPLHHLSDWVVTSSSSSICHWNGVTCNTNSHVRAINLSGKNISSYNISSSVFQLPHVEHIDLSDNLLSGGISFSLSSLLYLNLSNNNFTGPVPSSFSRIQILDLSNNMFSGEIPHQIGSLTSLRYVDLGGNVLVGKIPDSVTNMTGLEYLTLASNQLVGEIPPKIVLMKSLKWIYFGYNNLSGEIPERIGELKNLNHLDLVYNNLTGHIPDSLGNLTNLEYLFLYQNKLTGRIPRSIFELRKLVSLDLSDNFLSGEISELVIRLQRLEILHLFSNNFTGKIPNAVTSLPRLQVLQLWSNGLTGEIPEDLGKHSNLTVLDLSTNKLSGKIPDSLCHSGALYKLILFSNSLQGELPNSLTSCTSLRRVRLQNNKFSGGLPSRLTQLPQVYLLDISGNQLSGRIDDRKWNMLSLQMLNLGNNNFSGELPTIFGSTKLEKLDLSENRFSGNIPRRLGSLSELMQLNLSNNKLYGEIPQELTSCRKLVLLDVSHNQLTGQIPTSLGDMPVLSLLDLSDNQFWGKIPENLGRVESLVQLNISHNHFHGHLPATGAFLAINASAVTGNDLCGGSGGLPPCKKGDKNPWFVVLWFAVGFVGFALAAFLVTCSRRRNSLELKRVENEDGTWEIQFFDSKFAKSIAMDDILSSAKAGHVIAKGKNWVSYEGKCMASGMQFEVKEIRDLNSVPLSFWEDLMELGKLRHPNIFKLMGLCRSGKGAFLVYEDAEGKSLSQVVKNLSWESRRKITVGIAKALKFLHAQYSSVILVGDMSSESIIVDGNDIPRLKLSPPALFKGSISSPYVAPEVRNGKEVTEKSDVYGFGVVLIELLTGRRGVGTEEEGSIVEWARFCYSDCHWETWIDPTMKGGKQNDVVEAMNLALHCTAMDPTARPCASVVFKALSAVTCTHSVLSVSALQP 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00559 993 PRINTS Leucine-rich repeat signature 537 550 - -
Accr3g00559 993 PRINTS Leucine-rich repeat signature 397 410 - -
Accr3g00559 993 Pfam Protein kinase domain 741 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00559 993 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 690 801 - -
Accr3g00559 993 SUPERFAMILY L domain-like 283 627 - -
Accr3g00559 993 ProSiteProfiles Protein kinase domain profile. 726 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00559 993 Pfam Leucine rich repeat N-terminal domain 70 109 IPR013210 -
Accr3g00559 993 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 263 339 - -
Accr3g00559 993 Gene3D Transferase(Phosphotransferase) domain 1 803 987 - -
Accr3g00559 993 SUPERFAMILY Protein kinase-like (PK-like) 723 976 IPR011009 -
Accr3g00559 993 Gene3D Ribonuclease Inhibitor 344 659 IPR032675 -
Accr3g00559 993 ProSiteProfiles Leucine-rich repeat profile. 396 418 IPR001611 GO:0005515
Accr3g00559 993 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 421 977 - -
Accr3g00559 993 SUPERFAMILY L domain-like 70 340 - -
Accr3g00559 993 SMART LRR_sd22_2 513 539 - -
Accr3g00559 993 SMART LRR_sd22_2 298 324 - -
Accr3g00559 993 SMART LRR_sd22_2 274 295 - -
Accr3g00559 993 SMART LRR_sd22_2 394 417 - -
Accr3g00559 993 Gene3D Ribonuclease Inhibitor 69 179 IPR032675 -
Accr3g00559 993 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 352 651 - -
Accr3g00559 993 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 175 262 - -
Accr3g00559 993 Gene3D Ribonuclease Inhibitor 180 269 IPR032675 -
Accr3g00559 993 Gene3D Ribonuclease Inhibitor 270 343 IPR032675 -
Accr3g00559 993 Gene3D Phosphorylase Kinase; domain 1 692 800 - -
Accr3g00559 993 SMART LRR_typ_2 157 180 IPR003591 -
Accr3g00559 993 SMART LRR_typ_2 370 394 IPR003591 -
Accr3g00559 993 SMART LRR_typ_2 274 297 IPR003591 -
Accr3g00559 993 SMART LRR_typ_2 537 561 IPR003591 -
Accr3g00559 993 SMART LRR_typ_2 298 322 IPR003591 -
Accr3g00559 993 SMART LRR_typ_2 395 418 IPR003591 -
Accr3g00559 993 SMART LRR_typ_2 490 513 IPR003591 -
Accr3g00559 993 SMART LRR_typ_2 226 250 IPR003591 -
Accr3g00559 993 SMART LRR_typ_2 585 609 IPR003591 -
Accr3g00559 993 Pfam Leucine rich repeat 276 333 IPR001611 GO:0005515
Accr3g00559 993 Pfam Leucine rich repeat 371 431 IPR001611 GO:0005515
Accr3g00559 993 Pfam Leucine rich repeat 180 239 IPR001611 GO:0005515
Accr3g00559 993 Pfam Leucine rich repeat 515 574 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00559 Accr-Chr3 6328720 6332213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00559 47 976 Receptor kinase-like Gene Family AT2G25790 52.991 0.0 921
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Accr3g00559 Pkinase 4e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00559 - - gmx:100777118 1193.33