Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00553 ATGCCTGAACTGCGTAGCAGAGCGCGCAGGAACCGAGCATTACATAACCCAATCCCCAATCCGATTACCCAATCCCAAAAGCCCACGGTAAGAACTCGCCAGAGGAGGAGAACCAACGCGCAGAACAGGGAGAATCCGCAGCAGAAGAACACGATCGGTGTTGATGAAACTAATTATATTGTGAGTAGGGACATTGGTGCCGTTCCTGAAACGAGGACTTTGGGAGATAAGGAAGGAAAAGAACAAGGACAAGCGCCAGACGCAAAGCTTAGGGTTTTGAGAGAGAAAGGTGGGGATAAAGCAATGGATGATTACGATAGTGGCGGTCACAGTCCCGATAAGGCTCTAGCTGCCGAAGACGAGGGCTGCACCGCTCCGTTACCTGAGAAGGTCCAGGTTGGTGGTTCACCAACATACAGAATTGATAGAAAATTGGGAAAAGGAGGATTTGGACAAGTCTATGTTGGCAGGCGTGTTGGTGCAACAAATCCCGCTGAACTGACCGGTCCTGCAGCTGTGGAGGTGGCCTTAAAGTTTGAGCATAGAAGCAGTAAAGGCTGCAACTATGGACCACCATATGAGTGGCAGGTCTACAATGTCTTGGGTGGTAGTCATGGTGTTCCAAGAGTTCATTTTAAGGGGAGGCATGGTGATTATTATATTATGGTAATGGATATGCTTGGCCCTAGTCTATGGGATGTGTGGAATAACAACTCTCATTCGATGTCTATAGACATGGTAGCTTGTATTGCCATTGAGGCAATATCCATATTAGAGAAGATGCATTCTAAAGGCTATGTGCATGGTGATGTAAAACCTGAGAACTTCTTGCTTGGCCCCCCGGGAACTCCTGATGAGAAGAAGCTGTTTCTTGTCGATCTGGGATTAGCTACCAGATGGCGAGATAATTCAACAGGCCTTCATGTTGAGTATGATCAACGCCCAGATGTATTTAGGGGAACAGTAAGATATGCTAGTGTGCATGCTCATCTTGGTAGAACTGGCAGCAGAAGAGATGATTTGGAATCTCTTGCTTATACACTGATCTTCCTTCTTCGTGGTCGGCTTCCGTGGCAAGGATATCAGGGAGAAAATAAAGGATTCCTTGTTTGCAAGAAGAAGATGGCCACTTCCCCAGAAACTTTGTGCTGTTTTTGTCCTCTACCCTTTCGACAGTTTGTTGAGTATGTTGTGAATTTGAAGTTTGATGAAGAACCAAACTATGCAAAGTATATCTCCCTTTTTGATGGAATTGTTGGTCCAAATCCAGACATCAGGCCAATAAATACTGAGGGTGCTCAGAAACTTATATTTCAGGTTGGTCATAAGAGAGGACGATTAACCATTGAAGATGATGATGATGAACAACCAAAGAAGAAGGTCAGAATGGGAATGCCAGCGACTCAATGGATCAGTGTTTATAATGCTCGTCGACCAATGAAGCAAAGGTATCATTACAATGTGGCAGATATGCGCTTGTCCCAACACATTGAGAAAGGAAATGAGGATGGGTTATTTATAAGTAGTGTGGCTTCTTGTTCCAATCTTTGGGCACTTATTATGGATGCTGGCACTGGTTTCTCTTCACAAGTCTATGAACTCTCACCCTATTTTCTTCATAAGGAATGGATTATGGAACAATGGGAAAAAAATTATTACATCAGTGCTATAGCAGGGGCTAATAATGGAAGCTCACTGGTTGTAATGTCTAAAGGGACCCAGTACTTGCAGCAGTCCTATAAAGTTAGTGATTCATTCCCATTCAAGTGGATTAATAAGAAATGGAGAGAGGGCTTTTATGTCACTGCCATGGCAACTGCTGGAAGTAGATGGGCAATTGTCATGTCCCGTGGTGCTGGATTTTCAGATCAGGTTGTGGAACTTGATTTCCTGTATCCCAGTGAAGGTATTCATAGGAGGTGGGATCACAATTACCGCATCACATCTACTGCTGCAACATGGGACCAAGCTGCTTTTGTTCTTAGCGTCCCAAGGAGAAAACCAGCTGATGAAACTCAAGAGACGCTTCGTACCTCTGCTTTCCCTAGTACTCATGTCAAGGAAAAGTGGGCCAAGAACTTGTATATAGCATCTATTTGTTATGGGAGAACAGTTTCATGA 2121 0.4437 MPELRSRARRNRALHNPIPNPITQSQKPTVRTRQRRRTNAQNRENPQQKNTIGVDETNYIVSRDIGAVPETRTLGDKEGKEQGQAPDAKLRVLREKGGDKAMDDYDSGGHSPDKALAAEDEGCTAPLPEKVQVGGSPTYRIDRKLGKGGFGQVYVGRRVGATNPAELTGPAAVEVALKFEHRSSKGCNYGPPYEWQVYNVLGGSHGVPRVHFKGRHGDYYIMVMDMLGPSLWDVWNNNSHSMSIDMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATRWRDNSTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFCPLPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKLIFQVGHKRGRLTIEDDDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVADMRLSQHIEKGNEDGLFISSVASCSNLWALIMDAGTGFSSQVYELSPYFLHKEWIMEQWEKNYYISAIAGANNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDHNYRITSTAATWDQAAFVLSVPRRKPADETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVS 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00553 706 SUPERFAMILY Protein kinase-like (PK-like) 138 419 IPR011009 -
Accr3g00553 706 ProSiteProfiles Protein kinase domain profile. 139 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00553 706 Gene3D Transferase(Phosphotransferase) domain 1 111 455 - -
Accr3g00553 706 SMART serkin_6 139 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00553 706 MobiDBLite consensus disorder prediction 1 88 - -
Accr3g00553 706 PANTHER CASEIN KINASE-RELATED 133 672 - -
Accr3g00553 706 MobiDBLite consensus disorder prediction 70 88 - -
Accr3g00553 706 ProSitePatterns Protein kinases ATP-binding region signature. 145 178 IPR017441 GO:0005524
Accr3g00553 706 MobiDBLite consensus disorder prediction 43 57 - -
Accr3g00553 706 Pfam Protein kinase domain 139 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00553 706 FunFam casein kinase 1-like protein HD16 112 462 - -
Accr3g00553 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Accr3g00553 706 CDD STKc_CK1 139 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00553 Accr-Chr3 6290431 6294555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00553 17 373 AGC Kinase Gene Family AT3G08730 21.705 1.22e-08 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Accr3g00553 Pkinase 9.3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00553 - - zju:107420390 1241.1