Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00536 ATGGCGATTGCAGCAGAGACCCAGCCTCAGCCTCCATCTCATGGCAAGACTTCTTCTGAGGCTTCTGCTGTGGAGAACAGAAGGTGGACCCTCAACGACTTTGATATTGGAAAGCCTCTTGGAAGGGGAAAATTTGGTCATGTCTATTTGGCCAGAGAAAAGAGAAGTAATCACATTGTTGCTCTGAAAGTCCTCTTCAAGAGCCAATTGCAACAGTCCCAAGTCGAGCATCAACTTAGACGAGAAGTTGAAATCCAAAGTCATCTGCGACATCCTAACATTTTACGCCTTTATGGATACTTTTATGACCAGAAACGAGTTTATTTGATTTTAGAGTATGCACCCAAAGGTGAACTTTACAAGGAATTACAGAAATGCAAATATTTCAGTGAAAGACGTGCTGCTACTTATGTTGCTTCATTGGCCCGAGCCCTTATATATTGCCATGGAAAGCATGTAATACATAGGGATATTAAACCTGAGAACCTTCTTATTGGCGCCCAGGGTGAACTAAAAATTGCAGACTTTGGGTGGTCCGTGCACACATTTAACCGCAGGCGGACCATGTGTGGAACGCTAGATTATCTTCCTCCTGAGATGGTGGAGAGCGTAGAACATGATGCAAGCGTTGATATATGGAGTCTTGGTGTCCTGTGTTATGAGTTTCTCTATGGAGTCCCTCCTTTTGAGGCTAAAGAACATTCTGAGACATACAGAAGAATAATCCAAGTGGATCTCAAGTTCCCGCCCAAACCAATTGTATCCTCTGCTGCAAAGGACCTCATTAGTCAGATGCTGGTGAAGGATTCTTCTCATCGTCTACCATTACACAAGCTTCTGGAACATCCTTGGATAGTTCAGAACGCTGAGCCGTCTGGTGTATACAAGTGCTAG 894 0.4407 MAIAAETQPQPPSHGKTSSEASAVENRRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAPKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDASVDIWSLGVLCYEFLYGVPPFEAKEHSETYRRIIQVDLKFPPKPIVSSAAKDLISQMLVKDSSHRLPLHKLLEHPWIVQNAEPSGVYKC 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00536 297 SUPERFAMILY Protein kinase-like (PK-like) 20 289 IPR011009 -
Accr3g00536 297 Gene3D Transferase(Phosphotransferase) domain 1 118 294 - -
Accr3g00536 297 FunFam serine/threonine-protein kinase Aurora-1 118 293 - -
Accr3g00536 297 SMART serkin_6 34 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00536 297 MobiDBLite consensus disorder prediction 1 23 - -
Accr3g00536 297 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 7 295 IPR030616 GO:0004672
Accr3g00536 297 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Accr3g00536 297 FunFam Aurora kinase A 26 117 - -
Accr3g00536 297 Gene3D Phosphorylase Kinase; domain 1 22 117 - -
Accr3g00536 297 ProSiteProfiles Protein kinase domain profile. 34 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00536 297 CDD STKc_Aurora 33 286 - -
Accr3g00536 297 PIRSF ILK 4 287 - -
Accr3g00536 297 ProSitePatterns Protein kinases ATP-binding region signature. 40 63 IPR017441 GO:0005524
Accr3g00536 297 Pfam Protein kinase domain 36 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00536 Accr-Chr3 6168607 6170986 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00536 25 296 CBL-interacting serine-threonine protein kinases AT5G10930 35.842 3.12e-55 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Accr3g00536 Pkinase 1.1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00536 K08850 - qsa:O6P43_015468 574.704