Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00535 ATGGCGATTGCAGCAGAGACCCAGCCTCAGCCTCCATCTCATGGCAAGGTAACTTCTTCTGAGGCTTCTGCTGTGGAGAACAGAAGGTGGACCCTCAACGACTTTGATATTGGAAAGCCTCTTGGAAGGGGAAAATTTGGTCATGTCTATTTGGCCAGAGAAAAGAGAAGTAATCACATTGTTGCTCTGAAAGTCCTCTTCAAGAGCCAATTGCAACAGTCCCAAGTCGAGCATCAACTTAGACGAGAAGTTGAAATCCAAAGTCATCTGCGACATCCTAACATTTTACGCCTTTATGGATACTTTTATGACCAGAAACGAGTTTATTTGATTTTAGAGTATGCACCCAAAGGTGAACTTTACAAGGAATTACAGAAATGCAAATATTTCAGTGAAAGACGTGCTGCTACTTATGTTGCTTCATTGGCCCGAGCCCTTATATATTGCCATGGAAAGCATGTAATACATAGGGATATTAAACCTGAGAACCTTCTTATTGGCGCCCAGGGTGAACTAAAAATTGCAGACTTTGGGTGGTCCGTGCACACATTTAACCGCAGGCGGACCATGTGTGGAACGCTAGATTATCTTCCTCCTGAGATGGTGGAGAGCGTAGAACATGATGCAAGCGTTGATATATGGAGTCTTGGTGTCCTGTGTTATGAGTTTCTCTATGGAGTCCCTCCTTTTGAGGCTAAAGAACATTCTGAGACATACAGAAGAATAATCCAAGTGGATCTCAAGTTCCCGCCCAAACCAATTGTATCCTCTGCTGCAAAGGACCTCATTAGTCAGATGCTGGTGAAGGATTCTTCTCATCGTCTACCATTACACAAGCTTCTGGAACATCCTTGGATAGTTCAGAACGCTGAGCCGTCTGGTGTATACAAGTGCTAG 897 0.4404 MAIAAETQPQPPSHGKVTSSEASAVENRRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAPKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDASVDIWSLGVLCYEFLYGVPPFEAKEHSETYRRIIQVDLKFPPKPIVSSAAKDLISQMLVKDSSHRLPLHKLLEHPWIVQNAEPSGVYKC 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00535 298 CDD STKc_Aurora 34 287 - -
Accr3g00535 298 PIRSF ILK 5 288 - -
Accr3g00535 298 SMART serkin_6 35 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00535 298 FunFam serine/threonine-protein kinase Aurora-1 119 294 - -
Accr3g00535 298 Gene3D Transferase(Phosphotransferase) domain 1 119 295 - -
Accr3g00535 298 ProSiteProfiles Protein kinase domain profile. 35 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00535 298 Pfam Protein kinase domain 37 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00535 298 Gene3D Phosphorylase Kinase; domain 1 23 118 - -
Accr3g00535 298 SUPERFAMILY Protein kinase-like (PK-like) 20 290 IPR011009 -
Accr3g00535 298 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 7 296 IPR030616 GO:0004672
Accr3g00535 298 MobiDBLite consensus disorder prediction 1 22 - -
Accr3g00535 298 ProSitePatterns Protein kinases ATP-binding region signature. 41 64 IPR017441 GO:0005524
Accr3g00535 298 FunFam Aurora kinase A 27 118 - -
Accr3g00535 298 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00535 Accr-Chr3 6168607 6170986 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00535 26 297 CBL-interacting serine-threonine protein kinases AT5G10930 35.842 3.29e-55 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Accr3g00535 Pkinase 1.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00535 K08850 - qsa:O6P43_015468 572.392