Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00514 ATGGATCGCCAAACCATCTTCTTTCTTTTTGGACTCATATTTTCCTTGTCTCTTGCATCACAAGCCATCAGTGACGGACAATTGCAGTTTTTTTATCTAATGGAGAAGTCTCTCTCCGGGAAATACCCGCTAAATTGGGATGTCACAGAAGGAAAACCTGTCTGCAACTTCACTGGAGTTGTCTGCAACAACCAAGGGGAAGTCATCAATCTTGACATCTCTGGTTGGTCACTCTCTGGAAACTTCCCTTCAGATATATGCACCTATCTGCCAGAGTTACGTTTTCTACGTCTCGGCCACAATCGTTTAAGAGGAAAATCCCTTGATAGCATCATCAACTGTTCTCACTTAGAAGAGCTTGACATGAATCACGTGTACCATACAGGAACCCTTCCAGATTTCTCACCCATGAAATCTCTAAGGATCCTGGATTTGTCATACAACTCCTTCAAAGGTCAGTTCCCGATGTCGGTATTTAATCTTACCAACCTTGAGGTGCTTAACTTCAACGAAAACGCTGGTTTCAACTTATGGGAGCTGCCGGAGGATGTGTACAAGATGAAAAACCTCAAGTCTTTGATCTTGTCGACATGCATGGTGCGTGGCCGAATCCCTGCATCCATAGGAAACGTTTCGACTCTGGTTGATCTTGAATTGAGTGGAAATTTTCTCACGGGTCAAATTCCTCCAGAGCTTGGAATGCTGAAAAACTTGCAGCAACTTGAGCTTTACTATAACCAACTTATTGGCAATATACCCAAGGAGCTAGGAAATCTCAAGGAACTCAGGGACTTGGACATGTCAGTCAATAAGCTGTCGGGAAGTATCCCAGAATCTATTTGTCGTCTTCCCAAGCTTGAAGTCTTGCAGCTATACAACAATAGTCTCACAGGAGAAATCCCAGGTGTGATAGCAAACTCGAAAACCTTAAGAATATTATCTCTTTATGACAATTTTTTGACCGGAGAAGTCCCAAGAAATCTGGGTCAGTTCTCAGGAATGGTAGTTCTAGATTTATCCGAGAACAGACTGTCTGGTCCATTGCCAACGGAGGTTTGCAAGGGAGGTCGACTGATGTACTTCCTTGTTCTGAATAATCTTTTTTCTGGAGAGCTACCTGACAGTTATGCAAAGTGCTGGACGATGTTGAGGTTTCGGGTCAGTAATAACCATTTGGTGGGCTCAATTCCCGAGGGGCTCCTTGGCCTCCCGCACGTTTCCATAATTGATTTGAGTAGCAATAATTTAAGTGGTCCAATTTCCAAGACTATTGGAAATCCTAGAAACTTGACAGAACTATTCATTCAGAAGAATAGGATTTCAGGCGTTATACCTCCAACAATCTCTCGAGCTACCAATCTGGTCAAGATTGATTTCAGCAACAACCTTTTGTCCGGTCCAATACCTTTCGAAATTGGCAACCTTAAAAGGCTTAACTTGCTGATGTTGCAAGGGAATAAGCTGAATTCGTCCATCCCTGGCTCACTTTCCTTATTAAAGTCCCTCAACGTTCTTGATCTCTCCAACAACCTTTTGACCGGTAGCATCCCTGAAAGTTTCTCTGATCTGCTACCGAACTCTATCAATTTTTCAAATAACTTGCTCTCTGGTCCAGTTCCTCCATCGTTGATAAAAGGAGGTTTAGTCGAAAGTTTCTCAGGGAATCCAGGTCTGTGTGCGTCACCCGTCTATGCTAACTCATCGGATCGAAATTTTCCCATATGTTCAAAGACTAGCAGCAAGAAGACGCTAAGCACTTTCTGGGTAGCAGGGATTTCAGTGGTTTTGATCATAACTGGAGCAACCTTGTTTTTGAAACGTAGGTGTAGCAAAGAGAGAGCCACAGTGGAACATGACGAAACACTGTCTTCGTCATTCTTCTCTTATGAAGCGAAGAGCTTTCACAGGATAACAATTGACCCACGGGAGATCGTCGAGGCCATGGTCGATAAGAATATAGTGGGGCGTGGAGGGTCTGGGACAGTCTACAAGATCGAGTTGAAAAGCAGCGAATTTGTCGCTGTGAAGCGGCTATGGGGTCGAAAGTCAAAGGATTCGGTTCCAGATCAGGATAGTTTAGCTTTGGACAAGGCATTGAAAACTGAGGTGGAGACCCTGGGAAATATAAGACACAAGAACATAGTCAAGCTGTACTGCTACTTCTCGAGGTTGGATTGCAGCCTGTTAGTTTATGAGTACATGCCAAATGGTAATCTTTGGGATGCTCTACACAAAGGTTCGGTCCATTTGGATTGGCCTACGCGCCATAAGATTGCACTGGGGACAGCACAGGGTGTGGCATACCTCCACCATGATTTGCTCCCTCCTATAATTCATAGAGACATCAAGTCAACTAACATCCTTCTCGATGTTGATTACCAACCCAAGGTCGCAGATTTCGGGATTGCCAAGGTATTGCAGGCAAGAGGAGGGAAGGACTCCACATCTACTATTATTGCAGGCACATATGGTTACTTGGCACCAGAATATGCTTATTCTTCCAGAGCATCTGTCAAGTGTGATGTTTATAGTTTTGGGGTGATTTTAATGGAACTGATAACTGGGAAGAAGCCTGTGGAGGCAGAATTTGGAGAGAACAGAAACATCGTTTATTGGGTTTCAAACAAAGTGGACAGCAAGGAAGGGGCTAGTGAGGTATTAGACAAGCGATTGGAAGGGTCTTACAAAGAGGAAATGATTCAGGTGCTCCGAATCGCCATCCGTTGCACCTACAAGGCTCAAGCTCTTCGACCGACCATGAAAGAGGTAGTTCAAGTGCTAATTAAGGCAGACCCGTCTAGCAAGTTATCCAATAAGACCAAAGAAACATCAACTGCCACTTTGACAAAGAACTCAACATTGGAACTGTAG 2871 0.4403 MDRQTIFFLFGLIFSLSLASQAISDGQLQFFYLMEKSLSGKYPLNWDVTEGKPVCNFTGVVCNNQGEVINLDISGWSLSGNFPSDICTYLPELRFLRLGHNRLRGKSLDSIINCSHLEELDMNHVYHTGTLPDFSPMKSLRILDLSYNSFKGQFPMSVFNLTNLEVLNFNENAGFNLWELPEDVYKMKNLKSLILSTCMVRGRIPASIGNVSTLVDLELSGNFLTGQIPPELGMLKNLQQLELYYNQLIGNIPKELGNLKELRDLDMSVNKLSGSIPESICRLPKLEVLQLYNNSLTGEIPGVIANSKTLRILSLYDNFLTGEVPRNLGQFSGMVVLDLSENRLSGPLPTEVCKGGRLMYFLVLNNLFSGELPDSYAKCWTMLRFRVSNNHLVGSIPEGLLGLPHVSIIDLSSNNLSGPISKTIGNPRNLTELFIQKNRISGVIPPTISRATNLVKIDFSNNLLSGPIPFEIGNLKRLNLLMLQGNKLNSSIPGSLSLLKSLNVLDLSNNLLTGSIPESFSDLLPNSINFSNNLLSGPVPPSLIKGGLVESFSGNPGLCASPVYANSSDRNFPICSKTSSKKTLSTFWVAGISVVLIITGATLFLKRRCSKERATVEHDETLSSSFFSYEAKSFHRITIDPREIVEAMVDKNIVGRGGSGTVYKIELKSSEFVAVKRLWGRKSKDSVPDQDSLALDKALKTEVETLGNIRHKNIVKLYCYFSRLDCSLLVYEYMPNGNLWDALHKGSVHLDWPTRHKIALGTAQGVAYLHHDLLPPIIHRDIKSTNILLDVDYQPKVADFGIAKVLQARGGKDSTSTIIAGTYGYLAPEYAYSSRASVKCDVYSFGVILMELITGKKPVEAEFGENRNIVYWVSNKVDSKEGASEVLDKRLEGSYKEEMIQVLRIAIRCTYKAQALRPTMKEVVQVLIKADPSSKLSNKTKETSTATLTKNSTLEL 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00514 956 ProSitePatterns Protein kinases ATP-binding region signature. 654 676 IPR017441 GO:0005524
Accr3g00514 956 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 27 212 - -
Accr3g00514 956 FunFam leucine-rich repeat receptor-like protein kinase TDR 734 939 - -
Accr3g00514 956 SMART LRR_typ_2 235 259 IPR003591 -
Accr3g00514 956 SMART LRR_typ_2 475 498 IPR003591 -
Accr3g00514 956 SMART LRR_typ_2 90 115 IPR003591 -
Accr3g00514 956 SMART LRR_typ_2 499 522 IPR003591 -
Accr3g00514 956 SMART LRR_typ_2 331 355 IPR003591 -
Accr3g00514 956 SMART LRR_typ_2 283 306 IPR003591 -
Accr3g00514 956 SMART LRR_typ_2 161 187 IPR003591 -
Accr3g00514 956 FunFam Leucine-rich repeat receptor-like protein kinase 177 279 - -
Accr3g00514 956 Pfam Protein kinase domain 650 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00514 956 SUPERFAMILY RNI-like 68 366 - -
Accr3g00514 956 SUPERFAMILY Protein kinase-like (PK-like) 640 927 IPR011009 -
Accr3g00514 956 FunFam receptor protein-tyrosine kinase CEPR1 631 733 - -
Accr3g00514 956 Gene3D Transferase(Phosphotransferase) domain 1 734 953 - -
Accr3g00514 956 SUPERFAMILY L domain-like 289 540 - -
Accr3g00514 956 Gene3D Ribonuclease Inhibitor 180 279 IPR032675 -
Accr3g00514 956 Gene3D Phosphorylase Kinase; domain 1 632 733 - -
Accr3g00514 956 Gene3D Ribonuclease Inhibitor 280 572 IPR032675 -
Accr3g00514 956 ProSitePatterns Serine/Threonine protein kinases active-site signature. 777 789 IPR008271 GO:0004672|GO:0006468
Accr3g00514 956 SMART serkin_6 648 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00514 956 FunFam Receptor protein-tyrosine kinase CEPR1 283 569 - -
Accr3g00514 956 ProSiteProfiles Protein kinase domain profile. 648 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00514 956 PRINTS Leucine-rich repeat signature 499 512 - -
Accr3g00514 956 PRINTS Leucine-rich repeat signature 334 347 - -
Accr3g00514 956 Gene3D Ribonuclease Inhibitor 30 179 IPR032675 -
Accr3g00514 956 MobiDBLite consensus disorder prediction 935 956 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00514 Accr-Chr3 5944308 5947486 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00514 24 943 Receptor kinase-like Gene Family AT5G49660 65.628 0.0 1233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr3g00514 Pkinase 3.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00514 - - qsa:O6P43_015448 1422.14