Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00513 ATGCTACTTCCCTCCACCTTCCCGCGTTTCTCTTCCCTCCTTCCACTCCTCTGTTTCGTTTCAATCCTCGCCGGAGTCAACTCCGATGAACCAGAACTTCAACTTCTTTTAAACCTCAAAGCAGCTCTTCAGACATCAAATACCACCATGTTTGACTCGTGGAACAATTCCAACTCAGTATGCAGATTCAATGGAATCACGTGCAATTCAAGAGGTTCGGTGACTGAAATGGATCTCTCCAATCACATGCTCTCTGGAGTTCTTCCTTTCGATTCCATTTGCCAGCTCCAATCACTCGAGAAGCTCTCATTTGGGTTCAATTCATTGTATGGAAACATCTCCAACGATTTGAGCAACTGCGTCAAATTGAAGTACTTGGACTTGGGCAATAATATTTTCTCGGGAACGTTCCCTGACATTTCAACTCTCACTCAATTGAAGTATCTGTATTTAAATCAGAGCGGCTTTTCTGGAACATTCCCATGGAAGTCGCTGCAAAATATGGCGAATCTTGAGGTGTTAAGCGTCGGAGATAACCCCTTTGACCTTACTCCTTTCCCTACAGAAGTTGTAAAGCTCAAGAATTTGAAATGGTTATATATGTCAAATTGCACTCTTGGTGGGAAAATACCAACGGGGATCGGTAACCTTACAGAGCTCATAAACTTGGAATTTTCTGACAACTTTATATCTGGTGAGATTCCTTCGGAGATCGGGAAGCTTCAGAATCTATGGCAGCTTGAGATGTACAACAATTCGTTCACTGGGAAGCTTCCATATGGGTTAAGAAACTTGACAAAGTTAGAGTTCTTTGACGCGTCAATGAATAATCTTGCTGGCAATCTTTCTGAATTGAGGTTCTTGAGTAATCTCGTTTCTCTGCAATTATTTGAAAACGAATTCTCCGGGGAAATCCCGCCGGAGTTTGGTGAATTCAGAAAGCTTGTTAACTTATCGTTATACAGAAACAGCTTGACTGGTCCTATTCCTCAAAAGATTGGATCTTGGGCTGAGTTTGATTACATCGATGTGTCCGAGAATTTCTTAACTGGTCTTATTCCTCCAGATATGTGCAAACAAGGGAAGATGCACGCGCTGCTAGTTCTTCAGAACAAGCTCACTGGAGAAATTCCCGCAACGTATTCAAACTGTTTATCACTGCGTCGATTCAGAGTGAGCAATAATTCTCTCTCGGGTGTCATACCTCCTGGAATTTGGGGGTTGCCAAACGCAGAAATTATCGATATTGAATTGAATCGTTTGGGAGGTTCAATCACTTCAGATATCAAGAATGCGAAGACTCTGGCTCAAATATTCGCGAGTCAAAACCTCTTATCCGGTGAGATACCAGAAGAGATTTCAAAAGCTACCTCCCTGGTGACAGTTGACTTGAGCGAGAATCAAATTTCTGGGAAAATTCCGACAAGTATGGGCGAGCTTAAACAATTAAGCAGTTTAAGTTTACAGAGCAACAAGTTATTTGGTTCAATCCCAGATTCTCTGGGTTCATGTGTATCCCTCAGCGACATCAACCTATCACAAAATTCACTATCGGAAAAAATGCCGCCTTCTTTGGGCTTTTTACCAGTTCTCAATTCTCTGAACCTGTCAAGAAATGAACTTTCTGGTGAAATTCCGGCTAGTTTTTCTCGTCTCCGATTGAGCCTCTTTGATTTATCAAACAACAAATTGGCAGGTCCAATTCCACTGAGTCTTTCTTTTCAAGCTTATAACGGAAGCCTTGAGGGAAACTCCGATCTCTGCACCATGGACGTCGACATCACCTCCTTAAAGCGTTGCTCAGTACGTTCTGGCAATTCCAGACATTTCCGAACACTTCTCGTTTGCTTCTCAATAGGCTTAGTCTTGCTCCTCCTTTATCTAAGCCTTTACATGCAACAAAAGAAGAAGGAGAACTATCGAGAACGTTCTCTAAAGGAAGAGTCCTGGGATATAAAATCCTTCCACGTGCTAAGCTTCACAGAGGACGAGATTCTAGATTCCATCAAGGAAGAGAATCTCATAGGAAAAGGTGGCTCCGGGAACGTGTACAGAGTCACTCTCTCCAACGGAAAAGACCTCGCCGTCAAGCACATATGGAACACCGACAGCAGCGGCCGGAAAAGGAGCCGGAGCAGTGCTCCGATGATCGGAAAACGTGGGGTGAAATCAAAGGAATTTGACGCCGAAGTCCAGGCACTGAGCTCAATAAGGCACGTGAATGTGGTGAAACTATATTGCAGCATAACAAGCAAGGATTCAAATTTGTTGGTGTACGAATATTTTCCAAATGGGAGTTTGTGGGATATGCTTCACACGAACAAGAAGATGGAGCTTGACTGGGAGACAAGGTACGAGATTGCCGTAGGAGCAGCGAAAGGATTGGAGTACCTTCATCATGGGTGCGAGAGGCCTGTGATTCACAGGGACGTCAAGTCGAGTAACATTTTGTTGGATGAGTTTTTGAAGCCCAGAATTGCTGATTTTGGATTAGCTAAGATTGTTCAAGCCAACGTTGGCAAAGATTCCACTCATCTAGTTGCTGGAACTCACGGCTATATTGCCCCCGAATATGGGTACACATACAAGGTGAATGAGAAGATCGATGTTTATAGCTTTGGAGTGGTGCTAATGGAACTAGTGACGGGGAAGAGGCCAATAGAGCCAGAATTTGGGGAGAAGGAAGACATAGTGAACTGGGTGTGCAGCAAAGTGCAGCAAGAGAACAGGGAGAAAATAGTGGCAATGGTGGACTCAAGAATCGCAGATGTTTACAGAGAGGAGGCAATGAAGGTGATGAGGATAGCTATTATGTGCACAGCCAGGGTTCCAGCAGTGAGACCCACCATGAGAAGTGTGGTTCATATGCTGGAAGCTGCTGAGCCTTTTAAGTTGGTGGGAATTGTGGTCACTAAAGATGATGATTCTGCTAAGAAAATGCAGGTCCCTGAGGCTGCAAAGCTTCCATTGGATCTGAAAAATTAA 2985 0.4385 MLLPSTFPRFSSLLPLLCFVSILAGVNSDEPELQLLLNLKAALQTSNTTMFDSWNNSNSVCRFNGITCNSRGSVTEMDLSNHMLSGVLPFDSICQLQSLEKLSFGFNSLYGNISNDLSNCVKLKYLDLGNNIFSGTFPDISTLTQLKYLYLNQSGFSGTFPWKSLQNMANLEVLSVGDNPFDLTPFPTEVVKLKNLKWLYMSNCTLGGKIPTGIGNLTELINLEFSDNFISGEIPSEIGKLQNLWQLEMYNNSFTGKLPYGLRNLTKLEFFDASMNNLAGNLSELRFLSNLVSLQLFENEFSGEIPPEFGEFRKLVNLSLYRNSLTGPIPQKIGSWAEFDYIDVSENFLTGLIPPDMCKQGKMHALLVLQNKLTGEIPATYSNCLSLRRFRVSNNSLSGVIPPGIWGLPNAEIIDIELNRLGGSITSDIKNAKTLAQIFASQNLLSGEIPEEISKATSLVTVDLSENQISGKIPTSMGELKQLSSLSLQSNKLFGSIPDSLGSCVSLSDINLSQNSLSEKMPPSLGFLPVLNSLNLSRNELSGEIPASFSRLRLSLFDLSNNKLAGPIPLSLSFQAYNGSLEGNSDLCTMDVDITSLKRCSVRSGNSRHFRTLLVCFSIGLVLLLLYLSLYMQQKKKENYRERSLKEESWDIKSFHVLSFTEDEILDSIKEENLIGKGGSGNVYRVTLSNGKDLAVKHIWNTDSSGRKRSRSSAPMIGKRGVKSKEFDAEVQALSSIRHVNVVKLYCSITSKDSNLLVYEYFPNGSLWDMLHTNKKMELDWETRYEIAVGAAKGLEYLHHGCERPVIHRDVKSSNILLDEFLKPRIADFGLAKIVQANVGKDSTHLVAGTHGYIAPEYGYTYKVNEKIDVYSFGVVLMELVTGKRPIEPEFGEKEDIVNWVCSKVQQENREKIVAMVDSRIADVYREEAMKVMRIAIMCTARVPAVRPTMRSVVHMLEAAEPFKLVGIVVTKDDDSAKKMQVPEAAKLPLDLKN 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00513 994 Gene3D Ribonuclease Inhibitor 286 360 IPR032675 -
Accr3g00513 994 SUPERFAMILY L domain-like 285 602 - -
Accr3g00513 994 Gene3D Ribonuclease Inhibitor 361 473 IPR032675 -
Accr3g00513 994 Gene3D Ribonuclease Inhibitor 474 596 IPR032675 -
Accr3g00513 994 Gene3D Ribonuclease Inhibitor 188 285 IPR032675 -
Accr3g00513 994 FunFam Leucine-rich receptor-like protein kinase family protein 187 284 - -
Accr3g00513 994 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 762 972 - -
Accr3g00513 994 SUPERFAMILY L domain-like 68 358 - -
Accr3g00513 994 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Accr3g00513 994 Pfam Protein kinase domain 671 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00513 994 ProSiteProfiles Protein kinase domain profile. 669 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00513 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Accr3g00513 994 SUPERFAMILY Protein kinase-like (PK-like) 659 958 IPR011009 -
Accr3g00513 994 FunFam Leucine-rich repeat receptor-like protein kinase TDR 285 602 - -
Accr3g00513 994 Gene3D Ribonuclease Inhibitor 29 187 IPR032675 -
Accr3g00513 994 FunFam Receptor-like protein kinase HAIKU2 652 761 - -
Accr3g00513 994 Gene3D Phosphorylase Kinase; domain 1 653 761 - -
Accr3g00513 994 SMART serkin_6 669 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00513 994 FunFam Probable inactive receptor kinase RLK902 29 186 - -
Accr3g00513 994 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 22 957 - -
Accr3g00513 994 Gene3D Transferase(Phosphotransferase) domain 1 762 971 - -
Accr3g00513 994 Pfam Leucine Rich Repeat 531 552 IPR001611 GO:0005515
Accr3g00513 994 ProSitePatterns Protein kinases ATP-binding region signature. 675 697 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00513 Accr-Chr3 5934745 5937992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00513 7 975 Receptor kinase-like Gene Family AT1G09970 63.347 0.0 1196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr3g00513 Pkinase 7.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00513 - - qsa:O6P43_015409 1390.94