Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00508 ATGGGAACAGGTTGGAGACGAGCTTTTTGCACTCGTGACCCTGAATCTACCATATCCGATAAGCAGCAGAGAGGCACGAGTCCTAGCCCCAGTCCAAGAAGCTGTGTCCGATTGGGTTTTCTCTCCGGCGGAAGCAACCCTTCCACGCCACGCTTGCAGCAGCAATCTCAAGCTGTGTCTAGTCCTCGCTTGCGTTGCCCAACAGTTTCAGAAGCAGCAGCAAACGTCAATGAGAGCCCCAGATTCCAGAGCAAAAGTACTCCCAGGGCAACCAAGTCGCCAAAAACCAGTTCTACCTCAAATCCCACATCTCCGCGCACTCCTTTGAAGCTATCTCTCTTCAAGAATAGCTTCAAATTCCGTAGTAGTTGTGGAATCTGTTTGAATAGTGTAAAAACCGGTCAGGGAACGGCCATTTACACGGCGGAATGTACTCACGCCTTTCACTTTCCCTGTATCGCCGATTATGTACGCAAACATGGAAGCCTAGTCTGCCCCGTCTGCAACGCTGCCTGGAAAGACGTGCCTCTCCTAGCCGCACACAAGAACCACGCCACCGAATCCGCCGAAAAGAACGACATCGTCGTGGTTGACAAGAGCGTTATAAAACCAAATGCCACCCAGAAGACTAAGGAAGACTCATCCCCAGTTTTCAGAGTCAAGCCTATGGAACCGCCTCAACAATTACCACAAAAACAGCCAAAGCAACCTGATTCATACAGGTCCTACGACGATGATGAGCCACTTCTATCTCCCACGGCCGGTGGTGGTCGAATCATTCCAATACCTGAAGCCGACGAGGACGCCGAAGAAGAAGAAGACGAGGACGACGTTGAAGAATTCCAGGGATTTTTTGTCAACACAAAATCTTCATCCTCAATCAAATCTTGCTCCGATCACTTGCAAATAAGCGACAAAGATTCCAGAAACGTACATGTGAAGTTGATCCCCGAGTGTGCCGTAGTGTCAGTCTCTCGAATCTACGAGACTTACGCTTTGGTTCTGAAAGTGAAGGCTCCTCCGCCGCCACCTCCGGCTCGTAGTGGCAATAACTGTACGACACCGCGTCTTGGTCAGTCGCAACGAGCTCCCATAGATCTTGTAACGGTTCTTGACGTTGGTGGAAGCATGACAGGCGCGAAGCTGCACATGCTTAAGCGCGCAATGCGCTTGGTTATTTCCTCACTCAGCCCAGCCGATAGGCTCTCCATAGTGGCTTTCTCGGCCACTTCCAAGCGGCTCTTACCTTTGAGAAGAATGACGGCTCAAGGACAGCGTGTGGCTCGGCGTATCATCGATCGGCTCGTCTCGGGCCATGGGTCTTGTGTGGGCGATGCTCTGAGAAAAGCCACCAAAGTGCTCGAGGATCGCAGGGAGAGAAACCCGGTTGCCAGTGTAATGCTCCTATCGGACGGTCAGGAAGAACGAGTCCAAAGCAGTAACATCAACAACCGACGAAAGTCCTCGAGCCACGCCTCCTCGACCCGATTCGCCCACATCGAGATTCCGGTTCATGCGTTCGGGTTCGGGAAAAAGAGCGGTTTCAGCCACGAGCCGGGCGAGGATGCATTTGCCAAGTGCGTTGGCGGGTTATTGAGTGTGGTCGTACAGGACTTGAGAATTCAACTCGGCTTCCAATCTGGCTCATCGACGGCTGAAATCAGCGGCATCTATTTATGCGGCGGTCGAACCACAGCACTGAGCTCAGGCTGCGTACGGCTCGGCGACTTGTACGCCGGGGAAGAGAGGGAGTTACTGGTGGAGCTGAGAGTTCCAACGTCGGATTTGGGGGCCCACCACGTGTTGACGGTACGGTGCTTGTATAAGGACCCAGCTTCTCAAGAGATCGTATCTAGTAGGGAACAGGCCCTACTGGTTCCGCCACCTCAGGGCACGCGAAGCGAACGCTTGAGGAATTTCTTCATAGCAACACGAGCCATAGCCGAGTCTCGCCGGCTCGTTGACTACAACGACTTAACGAGCGCTCATCATTTACTGGCTTCGGCTCGGGCGCTCTTGATGCAGGCTAAGTCGAGCTCGGCTGAGGAGCATGTGCGCGCTTTAGAAGCTGAGCTGGCAGAACTTCATTGGCGCACTCAAAACCCGATGGATCAGCAGAAGATGACGCAGGAACGAAGGAGAGGGCAGGAGAGGGAAATGACAAGCTTTGTGGATGATAATGGGGAGCCGCTCACGCCGACATCGGCTTGGAGAGCCGCTGAGAAGCTTGCTAAGGTGGCCATCATGAAGAAGTCATTGAACAGAGTCAGCGATTTGCACGGCTTCGAAAACGCTAGGTTTTAA 2304 0.5304 MGTGWRRAFCTRDPESTISDKQQRGTSPSPSPRSCVRLGFLSGGSNPSTPRLQQQSQAVSSPRLRCPTVSEAAANVNESPRFQSKSTPRATKSPKTSSTSNPTSPRTPLKLSLFKNSFKFRSSCGICLNSVKTGQGTAIYTAECTHAFHFPCIADYVRKHGSLVCPVCNAAWKDVPLLAAHKNHATESAEKNDIVVVDKSVIKPNATQKTKEDSSPVFRVKPMEPPQQLPQKQPKQPDSYRSYDDDEPLLSPTAGGGRIIPIPEADEDAEEEEDEDDVEEFQGFFVNTKSSSSIKSCSDHLQISDKDSRNVHVKLIPECAVVSVSRIYETYALVLKVKAPPPPPPARSGNNCTTPRLGQSQRAPIDLVTVLDVGGSMTGAKLHMLKRAMRLVISSLSPADRLSIVAFSATSKRLLPLRRMTAQGQRVARRIIDRLVSGHGSCVGDALRKATKVLEDRRERNPVASVMLLSDGQEERVQSSNINNRRKSSSHASSTRFAHIEIPVHAFGFGKKSGFSHEPGEDAFAKCVGGLLSVVVQDLRIQLGFQSGSSTAEISGIYLCGGRTTALSSGCVRLGDLYAGEERELLVELRVPTSDLGAHHVLTVRCLYKDPASQEIVSSREQALLVPPPQGTRSERLRNFFIATRAIAESRRLVDYNDLTSAHHLLASARALLMQAKSSSAEEHVRALEAELAELHWRTQNPMDQQKMTQERRRGQEREMTSFVDDNGEPLTPTSAWRAAEKLAKVAIMKKSLNRVSDLHGFENARF 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00508 767 SUPERFAMILY vWA-like 364 539 IPR036465 -
Accr3g00508 767 ProSiteProfiles VWFA domain profile. 366 510 IPR002035 -
Accr3g00508 767 CDD vWA_C3HC4_type 365 536 - -
Accr3g00508 767 CDD RING-H2_WAVH2 121 174 - -
Accr3g00508 767 MobiDBLite consensus disorder prediction 41 64 - -
Accr3g00508 767 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 122 179 IPR013083 -
Accr3g00508 767 MobiDBLite consensus disorder prediction 1 108 - -
Accr3g00508 767 MobiDBLite consensus disorder prediction 707 724 - -
Accr3g00508 767 MobiDBLite consensus disorder prediction 704 731 - -
Accr3g00508 767 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 122 762 - -
Accr3g00508 767 MobiDBLite consensus disorder prediction 205 261 - -
Accr3g00508 767 Gene3D von Willebrand factor, type A domain 366 528 IPR036465 -
Accr3g00508 767 SMART VWA_4 364 549 IPR002035 -
Accr3g00508 767 Pfam von Willebrand factor type A domain 367 473 IPR002035 -
Accr3g00508 767 SMART ring_2 124 168 IPR001841 -
Accr3g00508 767 MobiDBLite consensus disorder prediction 474 495 - -
Accr3g00508 767 Pfam RING-like zinc finger 124 153 IPR001841 -
Accr3g00508 767 MobiDBLite consensus disorder prediction 72 108 - -
Accr3g00508 767 SUPERFAMILY RING/U-box 118 174 - -
Accr3g00508 767 ProSiteProfiles Zinc finger RING-type profile. 124 169 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00508 Accr-Chr3 5833296 5835718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00508 124 174 C3H Transcription Factor Family AT1G74410 43.137 1.01e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00508 - - gmx:100782780 974.156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00508 3 5833296 5835718 Accr3g00508 3 5833296 5835718 ECH